Table 2.
Novel repeat region variant alleles found in this study (N = 308 from father samples).
| Locus | Allele | Motif | Count | Frequency |
|---|---|---|---|---|
| DYS389II | 28 | [TAGA]11 [CAGA]2 N48 [TAGA]11 [CAGA]4 | 1 | 0.0032 |
| 33 | [TAGA]11 [CAGA]3 N48 [TAGA]15 [CAGA]4 | 1 | 0.0032 | |
| DYS390 | 21 | [TAGA]13 [CAGA]8 | 1 | 0.0032 |
| DYS392 | 14 | [ATA]13 AAA | 1 | 0.0032 |
| DYS437 | 14 | [TCTA]8 TCTG CCTG [TCTA]4 | 1 | 0.0032 |
| 15 | [TCTA]8 [TCTG]3 [TCTA]4 | 1 | 0.0032 | |
| DYS448 | 19.2 | [AGAGAT]11 N38 [AGAGAT]9a | 1 | 0.0032 |
| 20 | TGAGAT [AGAGAT]11 N42 [AGAGAT]8 | 2 | 0.0065 | |
| 23 | [AGAGAT]14 N42 [AGAGAT]9 | 1 | 0.0032 | |
| DYS460 | 10 | [CTAT]9 GTAT CTAT | 1 | 0.0032 |
| DYS533 | 11 | TATC TATA [TATC]9 | 1 | 0.0032 |
| DYS635 | 21 | [TAGA]9 [TACA]4 [TAGA]2 [TACA]2 [TAGA]4 | 1 | 0.0032 |
| 23 | [TAGA]11 [TACA]4 [TAGA]2 [TACA]2 [TAGA]4 | 5 | 0.0162 | |
| 24 | [TAGA]12 [TACA]4 [TAGA]2 [TACA]2 [TAGA]4 | 2 | 0.0065 | |
| DYF387S1a/b | 38 | [AAAG]3 GTAG [GAAG]4 [AAAG]2 GAAG [AAAG]2 [GAAG]7 [AAAG]18 | 1 | 0.0016 |
| 40 | [AAAG]3 GTAG [GAAG]4 [AAAG]2 GAAG AAAG [GAAG]11 [AAAG]17 | 1 | 0.0016 |
a
N38: [atagag]2 [agatag]3 ataga- —gaa; Human genome assembly coordinate: GRCh38 Y:22219024-22219027 [TAGA/−] deletion.