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. 2023 Aug 9;14:1083976. doi: 10.3389/fgene.2023.1083976

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Copyright © 2023 Kanakachari, Chatterjee, Reddy, Dange and Bhattacharya.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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An N-J tree was constructed using MEGA 10.1 software. Phylogenetic analysis (A,C,E) based on mtDNA Cytochrome c oxidase subunit gene sequences of seven native Indian breeds along with reference RJF. The numbers at the nodes represent the percentage of bootstrap values for interior branches after 1000 replications. A median-joining network was produced by the network software 10.1 for native Indian chicken breeds along with reference mtDNA based on the polymorphic site of the mtDNA Cytochrome c oxidase subunit genes (B,D,F). The area of each yellow circle is proportional to the frequency of the corresponding haplotype. The pink dots illustrate median vectors (mv) and the numbers on each link line represent mutated positions.