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. 2023 Aug 11;19(8):e1010727. doi: 10.1371/journal.pcbi.1010727

Fig 4. The benchmarking results of VarSCAT and UPS-indel for annotating indels with breakpoint ambiguity.

Fig 4

Benchmarking was performed with indels of (a) GIAB HG002, (b) GIAB HG003, (c) GIAB HG004, (d) GIAB HG005, (e) GIAB HG006, (f) GIAB HG007, (g) Platinum Genomes NA12877, and (h) Platinum Genomes NA12878. Venn Diagrams were used to show the concordance of indel annotations between the tools. The numbers are the counts of indels annotated by each tool.