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. 2023 Aug 3;26(9):107526. doi: 10.1016/j.isci.2023.107526
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

anti-B220 FITC, clone RA3-6B2 BD Cat.# 553088; RRID:AB_394618
anti-CD5 BB700, clone 53-7.3 BD Cat.# 742083; RRID:AB_2871364
anti-CD19 BV421, clone 1D3 BD Cat.# 562701; RRID:AB_2737731
anti-CD21 APC, clone 7G6 BD Cat.# 561770; RRID:AB_10892818
anti-CD43 PE, clone S7 BD Cat.# 553271; RRID:AB_394748
anti-CD23 PE-Cy7, clone B3B4 BioLegend Cat.# 101614; RRID:AB_2103036
anti-CD16/32 BD Cat.# 553142; RRID:AB_394657
anti-IgD PE, clone 11 -26c.2a BD Cat.# 558597; RRID:AB_647211
anti-CD19 PE-CF594, clone 1D3 BD Cat.# 562329; RRID:AB_11154580
anti-IgM APC, clone RMM-1 BioLegend Cat.# 406509; RRID:AB_315059
anti-CD43 APC-Cy7, clone 1B11 Biolegend Cat.# 121220; RRID:AB_2194192
anti-CD5 PerCP-Cy5.5, clone 53-7.3 ebioscience Cat.# 45-0051-82; RRID:AB_914334
biotinylated anti-CD9, clone KMC8 BD Cat.# 558749; RRID:AB_397103
anti-CD63 PE, clone NVG-2 BD Cat.# 564222; RRID:AB_2738678
biotinylated anti-CD81, clone Eat2 BD Cat.# 559518; RRID:AB_397259
anti-IgM HRP SouthernBiotech Cat.# 1020-05; RRID:AB_2794201
anti-IgG2a HRP SouthernBiotech Cat.# 1080-05; RRID:AB_2734756
anti-CD81 BV421, clone Eat2 BD Cat.# 740060; RRID:AB_2739825
rat IgG2a FITC isotype control, clone R35-95 BD Cat.# 554688; RRID:AB_10053774
rat IgG2a APC isotype control, clone RTK2758 Biolegend Cat.# 400512; RRID:AB_2814702
anti-CD4 PE-Cy5, clone GK1.5 ebioscience Cat.# 15-0041-82; RRID:AB_468695
anti-IgG AF488 ThermoFisher Scientific Cat.# A11055; RRID:AB_2534102

Chemicals, peptides, and recombinant proteins

Lipopolysaccharide Sigma Cat.# L6511
PtC liposomes FITC Dr. Aaron Kantor, Kantor Bioscience Consulting
streptavidin PE ebioscience Cat.# 12-4317-87
RBC lysis buffer Lonza Cat.# 10-548E
LIVE/DEAD fixable cell stain Invitrogen Cat.# L34966
RIPA lysis buffer ThermoFisher Scientific Cat.# 89900
Halt protease inhibitor cocktail ThermoFisher Scientific Cat.# 1862209
Halt phosphatase inhibitor cocktail ThermoFisher Scientific Cat.# 1862495
Triton X-100 Sigma Cat.# X100
Tween 20 Sigma Cat.# 9416
Laemmli SDS sample buffer Bio-Rad Cat.# 1610747
streptavidin HRP Pierce Cat.# 21130
purified mouse IgM BD Cat.# 557275
wheat germ agglutinin AF488 Invitrogen Cat.# W11261
phalloidin rhodamine ThermoFisher Scientific Cat.# R415
Prolong Gold/DAPI ThermoFisher Scientific Cat.# P10144

Critical commercial assays

Miltenyi gentleMACS Octo dissociator Miltenyi Cat.# 130-095-937
Miltenyi pan B cell isolation kit II Miltenyi Cat.# 130-104-443
bicinchoninic acid (BCA) protein assay kit Pierce Cat# 23227
4-15% tris-glycine gels Bio-Rad Cat# 4568086
Aldehyde sulfate beads (4 μm); Aldehyde sulfate beads (5μm) ThermoFisher Scientific Cat.# A37304; Cat.# A37306
imperial protein stain ThermoFisher Scientific Cat# 24615
anti-mouse IgM ELISA kit Bethyl Cat.# E90-101
round glass coverslips, #1.5, 12mm Thomas Scientific Cat.# 1217N79
Immun-Blot PVDF membrane Bio-Rad Cat# 1620177
SuperSignal West Pico PLUS ECL reagents ThermoFisher Scientific Cat# 34580
Lionheart FX automated live cell imager Biotek
AR1+ confocal microscope Nikon
Fortessa flow cytometer BD
Influx cell sorter BD

Experimental models: Cell lines

WEHI-231 mouse B cell lymphoma frozen stock
S9.6 hybridoma American Type Culture Collection (ATCC) Cat.# HB-8730; lot 63476317
CH-12 mouse B cell lymphoma frozen stock
HELA human cervical cancer frozen stock

Experimental models: Organisms/strains

C57BL/6 mouse The Jackson Laboratory https://www.jax.org
Ighm knock-out mice (B6; 129S4-Ighmtm1che/J) Dr. Kishore Alugupalli

Software and algorithms

Flowjo, v10.6.2 BD https://www.flowjo.com
Image J, version 1.51 National Institutes of Health https://imagej.nih.gov/ij/download.html
Prism, version 8.1.1 GraphPad https://www.graphpad.com/scientific-software/prism/
Photoshop 2018, 2021 Adobe https://www.adobe.com/products/photoshop.html
Image Lab Bio-Rad https://www.bio-rad.com/en-us/product/image-lab-software?ID=KRE6P5E8Z
Gen5 software (Lionheart microscope) Biotek
NIS-Elements C (Nikon confocal microscope) Nikon