TABLE 2.
Overview of sequence type distribution across each phylogroup from sequenced index and recurrent ESC-R E. coli isolates
| Typing group a , b | Index (n = 248) | Recurrent (n = 49) |
|---|---|---|
| Phylogroup B2 (n = 145) | 126 (50.8%) | 19 (38.8%) |
| ST131 (n = 129) | 102 (80.9%) | 17 (89.5%) |
| ST1193 (n = 15) | 14 (11.1%) | 1 (5.3%) |
| Other ST (n = 11) | 10 (7.9%) | 1 (5.3%) |
| Phylogroup A (n = 66) | 49 (19.8%) | 17 (34.7%) |
| ST10 (n = 13) | 8 (16.3%) | 5 (29.4%) |
| ST744 (n = 11) | 9 (18.4%) | 2 (11.8%) |
| ST167 (n = 11) | 8 (16.3%) | 3 (17.6%) |
| ST44 (n = 7) | 2 (4.1%) | 5 (29.4%) |
| Other ST (n = 24) | 22 (44.9%) | 2 (11.8%) |
| Phylogroup D (n = 36) | 30 (12.1%) | 6 (12.2%) |
| ST405 (n = 19) | 16 (53.3%) | 3 (50.0%) |
| ST38 (n = 9) | 7 (23.3%) | 2 (33.3%) |
| Other ST (n = 8) | 7 (23.3%) | 1 (16.7%) |
| Phylogroup F (n = 20) | 19 (7.7%) | 1 (2.0%) |
| ST648 (n = 15) | 14 (73.7%) | 1 (100.0%) |
| Other ST (n = 5) | 5 (26.3%) | 0 (0.0%) |
| Phylogroup B1 (n = 20) | 16 (6.5%) | 4 (8.2%) |
| ST224 (n = 6) | 5 (31.3%) | 1(25.0%) |
| Other ST (n = 13) | 11 (57.9%) | 3 (75.0%) |
| Phylogroup C (n = 9) | 7 (2.8%) | 2 (4.1%) |
| ST410 (n = 7) | 5 (71.4%) | 1 (50.0%) |
| Other ST (n = 2) | 2 (28.6%) | 1 (50.0%) |
a
Other ST consists of sequence types detected at ≤ 5 total counts within each phylogroup.
b
Phylogroup G consists of one observation (ST501), thus was not included in the table.