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. 2023 May 28;5(3):300–315. doi: 10.1007/s42995-023-00175-0

Table 1.

Data for the MAC genome assembly of Euplotes aediculatus

Parameter Two-telomere contigs One-telomere contigs Zero-telomere contigs Total
No. all contigs 13,145 14,105 8215 35,465
No. contigs ≥ 1 kb 11,618 11,772 8215 31,605
No. contigs ≥ 5 kb 1012 1412 1224 3648
No. contigs ≥ 10 kb 105 185 344 634
No. contigs ≥ 25 kb 2 3 47 52
No. contigs ≥ 50 kb 0 0 4 4
Largest contig (bp) 40,119 28,195 70,221 70,221
Smallest contig (bp) 529 500 1000 500
Total length (bp) 33,451,734 37,203,314 26,645,000 97,300,048
N50 (bp) 3036 3367 4305 3395
N75 (bp) 2020 2121 2273 2101
L50 (bp) 3496 3400 1549 8318
L75 (bp) 6880 6875 3690 17,424
GC (%) 31.09 29.5 31.92 30.71

N50/N75, the length of the contig at 50/75% of the cumulative total length of the whole genome. L50/L75, the smallest number of contigs whose length sum produces N50/N75. No., number of