Table 1.
Estimated occupancy of rrn operons in WT and Δrrn strains as a function of growth rate
Strain | Medium | Doubling time (min) | NrRNAP per cella | oriC copies per cell | rrn copies per cell | NrRNAP per rrn | RNAP occupancy of each rrnb |
---|---|---|---|---|---|---|---|
WT | M9Glu | 47 | 397 | 2.9 | 17.5 | 23 | 32% |
Δ5 | M9Glu | 57 | 238 | 2.5 | 4.8 | 50 | 69% |
Δ6 | M9Glu | 73 | 122 | 2.2 | 2.0 | 61 | 85% |
WT | RDM | 36 | 805 | 3.7 | 22.0 | 37 | 51% |
Δ5 | RDM | 46 | 420 | 2.9 | 5.6 | 75 | 104% |
Δ6 | RDM | 51 | 320 | 2.7 | 2.5 | 128 | 178% |
For the methods used to obtain the estimates for growth at 37°C, see the Materials and Methods.
aNumber of RNAP molecules transcribing rrn operons in the different strains.
b100% occupancy is defined as the RNAP occupancy at the maximum growth rate (72 rRNAPs/rrn). Note that this occupancy is substantially lower than the maximal physical occupancy (see also the Discussion).