Table 1.
Running time (in seconds) of seven methods applied to simulation (a = 0.06), bladder cancer and head and neck cancer data. For simulation data, the experiment was performed 10 times, and we reported the average execution time along with the standard deviation. HHotNet: Hierarchical HotNet.
| MultiFDRnet | FDRnet | HHotNet | HotNet2 | Domino | Netmix2 | BioNet | |
|---|---|---|---|---|---|---|---|
| Simulation | 3557(465) | 2588(672) | 3624(468) | 3,740,063(18,900) | 150(2) | 44,493(122) | 7382(1881) |
| Bladder cancer | 3840 | 2079 | 3372 | 3,725,313 | 139 | 44,017 | / |
| Head and neck cancer | 2546 | 1852 | 3581 | 3,726,267 | 521 | 44,013 | / |