TABLE 1.
Primers used for omp1-based PCR or DNA sequencing of the omp1 gene
Primer | Strand | Nucleotide sequence | Positiona |
---|---|---|---|
OMP1 | Sense | 5′-TGACGCTATCAGCATGCG-3′ | 165–182 |
CM3A | Antisense | 5′-GAATACATCAAAACGATCCC-3′ | 389–408 |
OMP11 | Sense | 5′-GGAAACTCCGCTTCCTTCAAC-3′ | 448–468 |
OMP6AS | Antisense | 5′-TGAGCGTATTGGAAAGAAGC-3′ | 640–659 |
OMP6S | Sense | 5′-TCTTTCCAATACGCTCAATC-3′ | 643–662 |
SERO2A | Antisense | 5′-TTTCTAGA(T/C)TTCAT(T/C)TTGTT-3′ | 1057–1076 |
SERO1A | Sense | 5′-ATGAAAAAACTCTTGAAATCGG-3′ | 1–22 |
OMP10 | Antisense | 5′-TCTTGCATGTGTTTGCCATAAGCGG-3′ | 350–326 |
OMP12 | Antisense | 5′-CAATAGAGGCATCCTTAGTCCC-3′ | 508–487 |
VD41 | Sense | 5′-TACATTGGAGTTAAATGGTCT-3′ | 868–888 |
According to the omp1 nucleotide sequence of C. trachomatis serovar strain J/UW36 (25).