Table 1.
Name | Primer/ Probe |
Sequence |
---|---|---|
HERV-H pol | Forward | 5′-TGGACTGTGCTGCCGCAA-3′ |
Reverse | 5′-GAAGSTCATCAATATATTGAATAAGGTGAGA-3′ | |
Probe | 6FAM-5′-TTCAGGGACAGCCCTCGTTACTTCAGCCAAGCTC-3′-TAMRA | |
HERV-K pol | Forward | 5′-CCACTGTAGAGCCTCCTAAACCC-3′ |
Reverse | 5′-TTGGTAGCGGCCACTGATTT-3′ | |
Probe | 6FAM-5′-CCCACACCGGTTTTTCTGTTTTCCAAGTTAA-3′-TAMRA | |
HERV-W pol | Forward | 5′-ACMTGGAYKRTYTTRCCCCAA-3′ |
Reverse | 5′-GTAAATCATCCACMTAYYGAAGGAYMA-3′ | |
Probe | 6FAM-5′-TYAGGGATAGCCCYCATCTRTTTGGYCAGGCA-3′-TAMRA | |
Syncytin 1 env | Forward | 5′-ACTTTGTCTCTTCCAGAATCG-3′ |
Reverse | 5′-GCGGTAGATCTTAGTCTTGG-3′ | |
Probe | 6FAM-5′-TGCATCTTGGGCTCCAT-3′-TAMRA | |
Syncytin 2 env | Forward | 5′-GCCTGCAAATAGTCTTCTTT-3′ |
Reverse | 5′-ATAGGGGCTATTCCCATTAG-3′ | |
Probe | 6FAM- 5′-TGATATCCGCCAGAAACCTCCC-3′-TAMRA | |
HERV-W env | Forward | 5′-CTTCCAGAATTGAAGCTGTAAAGC-3′ |
Reverse | 5′-GGGTTGTGCAGTTGAGATTTCC-3′ | |
Probe | 6FAM-5′-TTCTTCAAATGGAGCCCCAGATGCAG-3′-TAMRA | |
TRIM28 | Forward | 5′-GCCTCTGTGTGAGACCTGTGTAGA-3′ |
Reverse | 5′-CCAGTAGAGCGCACAGTATGGT-3′ | |
Probe | 6FAM-5′-CGCACCAGCGGGTGAAGTACACC-3′-TAMRA | |
SETDB1 | Forward | 5′-GCCGTGACTTCATAGAGGAGTATGT-3′ |
Reverse | 5′-GCTGGCCACTCTTGAGCAGTA-3′ | |
Probe | 6FAM-5′-TGCCTACCCCAACCGCCCCAT-3′-TAMRA | |
GAPDH | Forward | 5′-CGAGATCCCTCCAAAATCAA-3′ |
Reverse | 5′-TTCACACCCATGACGAACAT-3′ | |
Probe | 6FAM-5′-TCCAACGCAAAGCAATACATGAAC-3′-TAMRA |