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. 2023 Aug 11;24(16):12684. doi: 10.3390/ijms241612684

Table 1.

Oligonucleotides used for RT-PCR analysis and calculated size of the products.

Genes
Accession No.
Primer
No.
Primer Pairs Nucleotide
Positions
Annealing T
Size (bp)
Agr2
NM_011783.2
MB2190
MB2191
GTCTGCAATCCTGCTTCTTGT
GTCTTTAGCAGCTTGAGAGCTT
70–90
570–549
60 °C
501
Cdx1
NM_009880.4
MB2354
MB2355
GGACGCCCTACGAATGGAT
ACCAGATCTTTACCTGCCGC
489–507
704–685
60 °C
216
Cdx2
NM_007673.3
MB2352
MB2353
AGCCAAGTGAAAACCAGGACA
GATGCTGTTCGTGGGTAGGA
799–819
1320–1301
60 °C
522
Clca1
NM_017474.2
MB2176
MB2177
CTTATCACCTGGACAACGCA
TGGTCCCTGAGATCAACGAT
1589–1608
2436–2417
60 °C
848
Duox2
NM_001362755.1
MB2726
MB2727
GCCTGTCGAGTCTCGTTCAT
CCGCAAGAAGGTGATGAGGT
2934–2953
3383–3364
60 °C
450
Fut2
NM_001271993.1
MB2468
MB2469
CTCCCCCGGGATCCTTATCT
GTGGTAATTCTGCCACGGG
252–271
699–681
60 °C
448
Lgr5
NM_010195.2
MB2492
MB2493
GTCTCCTACATCGCCTCTGC
AGAAGGGTTGCCTACGAACG
538–557
1133–1114
60 °C
596
Lpo
NM_080420.3
MB3005
MB3006
GGCTGCCACGGGAGGTCAA
TTATAGGGTGGTGTGGGGCA
11–29
906–887
60 °C
896
Mki67
NM_001081117.2
MB2458
MB2459
AGAGCTAACTTGCGCTGACTG
TCTTGAGGCTCGCCTTGATG
129–149
618–599
60 °C
490
Muc2
NM_023566.4
MB2178
MB2179
GGCTCTACAGACAAGCAGAC
CATGAAGGTATGGTCAGGGC
1329–1348
2141–2122
60 °C
813
Nox1
NM_172203.2
MB2883
MB2884
AAGTTTCTCTCCCGAAGGACC
CCCTCAAGAAGGACAGCAGA
74–94
387–368
60 °C
314
Pdia6
NM_027959.4
MB2991
MB2992
TGGTCGGACGAGATCTGACA
TGAGACGCTGAGGTTCACTG
806–825
1513–1494
60 °C
708
Qsox1
NM_001024945.1
MB2546
MB2547
TATAGTGAGGCCCACCCACA
GTACATCTAGGGCAGTGGCTC
1370–1389
1895–1875
60 °C
526
Sod1
NM_011434.2
MB2837
MB2838
CGGTGAACCAGTTGTGTTGTC
GGTCTCCAACATGCCTCTCT
174–194
349–330
60 °C
176
Sod2
NM_013671.3
MB2839
MB2840
CTGGACAAACCTGAGCCCTA
GTTGTTCCTTGCAATGGGTCC
510–529
728–708
60 °C
219
Sod3
NM_011435.3
MB2184
MB2185
CTGCTGCTCGCTCACATAA
CGCCTGGAGACATCTATGC
119–137
1077–1059
60 °C
959
Spdef
NM_013891.4
MB2200
MB2201
AAGATATTGAGACGGCCTGC
TGTCTATCTGGGACCTTGGG
790–809
1528–1509
60 °C
739
Zg16
NM_026918.3
MB2995
MB2996
CCTCGGCCTCTGCTAATTCC
CCTGGATCACAGATTCCCCG
85–104
339–320
60 °C
255