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Co-phylogenetic reconstructions implemented in JANE4 (see text for details) with cost-scheme parameters loss, failure to diverge, and duplication each set to 1, duplication and host switch set to 2, and varying the co-speciation cost (Cost) by 0 or 1.
| Drosophila and Wolbachia | Invasive Mosquitoes, Drosophila, and Wolbachia | |||
|---|---|---|---|---|
| Cost 0 | Cost 1 | Cost 0 | Cost 1 | |
| Co-speciation | 8 | 8 | 9 | 7 |
| Duplication | 0 | 0 | 0 | 1 |
| Duplication and host switches | 7 | 7 | 8 | 9 |
| Loss | 1 | 1 | 2 | 1 |
