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. 2023 Aug 25;18(8):e0290444. doi: 10.1371/journal.pone.0290444

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© 2023 Wasniewski et al

This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

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Fig 1 — SARS-CoV-2 sequences detected on the mink farm in France are highlighted in purple. A. Bayesian phylogeny of all SARS-CoV-2 genomes from minks over the study period. Node and taxa labels are colored according to nextstrain (https://nextstrain.org) clade classification and main geographic clusters, respectively. B. Bayesian phylogeny of human-derived SARS-CoV-2 genomes collected in France and mink-derived SARS-CoV-2 genomes described in this study. A diversity-optimized dataset was obtained by collecting and filtering complete, high-quality genomes of SARS-CoV-2 detected in France (of human and mink origin). Taxa are colored according to the nextstrain clads classification.