Table 2.

Candidate QTL regions of seed coat color in B. napus

Chromosome	Region start (Mbp)	Region end (Mbp)	Peak delta SNP-index	aPeak difference value	Peak window start (Mbp)	Peak window end (Mbp)
ChrA03	28.99	30.32	0.363	0.002	29.14	30.23
ChrA03	30.76	31.8	0.368	0.003	30.76	31.76
ChrA03	32.57	33.87	0.388	0.031	32.84	33.87
ChrA03	35.84	37.91	0.39	0.037	36.18	37.18
ChrA05	9.08	10.19	0.446	0.087	90.8	10.08
ChrA05	11.86	16.38	0.374	0.008	12.14	13.14
ChrA05	17.26	18.28	0.384	0.024	17.26	18.27
ChrA09	22.78	31	0.444	0.092	25.97	26.98
ChrA09	32.7	48.81	0.857	0.497	44.19	45.19
ChrA10	18.86	20.91	0.471	0.103	19.91	20.91
ChrC08	40.89	44.18	0.472	0.112	41.26	42.26

^aPeak difference value is the difference between Δ(SNP-index) and the threshold value (P < 0.01). Bold font, The region where the target gene is located.