TABLE 1.
Sequences of primers used for detection of different genes by the PCR assay
| Gene | Primer sequence | Ampli- con size (bp) | Refer- ence |
|---|---|---|---|
| ctxA | CTC AGA CGG GAT TTG TTA GGC ACG | 301 | 16 |
| TCT ATC TCT GTA GCC CCT ATT ACG | |||
| zot | CAC TGT TGG TGA GCG TTA TCG | 243 | 6 |
| CAA GCG CTG TGG GTA GAA GTG AAA | |||
| ace | GCT TAT GAT GGA CAC CCT TTA | 284 | 6 |
| TTT GCC CTG CGA GCG TTA AAC | |||
| tcpA (El Tor) | GAA GAA GTT TGT AAA AGA AGA ACA C | 471 | 16 |
| GAA AGG ACC TTC TTT CAC GTT G | |||
| tcpA (classical) | CAC GAT AAG AAA ACC GGT CAA GAG | 617 | 16 |
| ACC AAA TGC AAC GCC GAA TGG AG | |||
| LTc | GCG ACA AAT TAT ACC GTG CT | 708 | 33 |
| CCG AAT TCT GTT ATA TAT GT | |||
| STc | ATT TTT C/ATT TCT GTA TTA/G TC | 105 | 30 |
| GC/TA CAG/A GCA GGA TTA CAA AA | |||
| VTc | GAA CGA AAT AAT TTA TAT GTG | 521 | 32 |
| TGA TGA TGG CAA TTG AGT AT |