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[Preprint]. 2023 Aug 18:arXiv:2308.09639v1. [Version 1]

Table 3:

Performance comparisons on the BDB2020+ benchmark set in terms of root mean square error (RMSE) and Pearson correlation coefficient (R) for different models before and after retraining using LP-PDBBind.

Model RMSE (kcal/mol) R
original retrained difference original retrained difference
AutoDock Vina 3.29 2.23 −32% 0.21 0.28 +33%
IGN 1.61 1.38 −14% 0.38 0.52 +37%
RF-Score 1.84 1.59 −14% 0.31 0.50 +61%
DeepDTA 1.99 2.15 +8% 0.17 0.06 −65%