Table 1.
Sequencing statistics and alpha diversity indices of samples collected from polluted and less polluted sites of river Yamuna
| Sample | Effective tags | Average length (nt) | Q30 | GC % | Alpha diversity indices | ||||
|---|---|---|---|---|---|---|---|---|---|
| Shannon | Simpson | ACE | Chao1 | Goods coverage | |||||
| Cyprinus carpio (α-C1) | 93,304 | 455 | 96.9 | 54.3 | 2.7 | 0.7 | 166.4 | 158.2 | 0.9 |
| Cyprinus carpio (α-C2) | 459,351 | 457 | 98.2 | 55.0 | 3.3 | 0.8 | 153 | 132.1 | 0.9 |
| Water (α-W1) | 25,118 | 443 | 97.1 | 50.6 | 4.9 | 0.9 | 485.3 | 473 | 0.9 |
| Water (α-W2) | 512,921 | 455 | 98.4 | 50.9 | 5.4 | 0.9 | 565.7 | 592 | 0.9 |
| Cyprinus carpio (β-C1) | 36,820 | 468 | 99.7 | 55.4 | 2.3 | 0.7 | 44 | 44 | 1.0 |
| Cyprinus carpio (β-C2) | 31,655 | 469 | 99.6 | 55.9 | 2.9 | 0.7 | 39 | 41 | 1.0 |
| Water (β-W1) | 92,580 | 426 | 95.7 | 52.9 | 3.3 | 0.5 | 745 | 693 | 0.9 |
| Water (β-W2) | 94,321 | 427 | 95.9 | 52.8 | 3.5 | 0.6 | 512 | 473 | 0.9 |