Table 8.
Classification results of algorithms using leave drug combinations out on HT29
HT29 | AUC | F1 score | F1 score* | Recall | Precision | Rank | Rank* | ||||
---|---|---|---|---|---|---|---|---|---|---|---|
Additive | Antagonism | Synergy | Additive | Antagonism | Synergy | ||||||
SVM | 0.5963 | 0.3566 | 0.1974 | 0.8117 | 0.1560 | 0.1381 | 0.6231 | 0.2758 | 0.3253 | 5.8 | 5.8 |
KNN | 0.5574 | 0.3429 | 0.1641 | 0.8660 | 0.1154 | 0.1147 | 0.6306 | 0.3209 | 0.2517 | 6.3 | 8.0 |
XGB | 0.6046 | 0.3559 | 0.1864 | 0.8737 | 0.1145 | 0.1378 | 0.6258 | 0.3090 | 0.4061 | 4.7 | 5.8 |
MLP | 0.5989 | 0.3448 | 0.1826 | 0.8462 | 0.1190 | 0.1418 | 0.6220 | 0.3028 | 0.3072 | 6.1 | 6.3 |
DT | 0.5067 | 0.3710 | 0.2527 | 0.6153 | 0.2574 | 0.2611 | 0.6238 | 0.2332 | 0.2597 | 6.1 | 6.0 |
GDBT | 0.6073 | 0.3655 | 0.2009 | 0.8641 | 0.1424 | 0.1435 | 0.6374 | 0.3020 | 0.3738 | 3.7 | 4.5 |
RF | 0.6121 | 0.3451 | 0.1884 | 0.8180 | 0.1137 | 0.1763 | 0.6279 | 0.2123 | 0.3260 | 5.7 | 6.1 |
Single-layer Network | 0.5284 | 0.2031 | 0.2482 | 0.3675 | 0.1728 | 0.4745 | 0.3439 | 0.1454 | 0.2572 | 8.1 | 6.0 |
DeepSynergy | 0.5118 | 0.2526 | 0.0576 | 0.8470 | 0.1346 | 0.0000 | 0.6155 | 0.1007 | 0.0000 | 9.1 | 10.1 |
MatchMaker | 0.5777 | 0.3124 | 0.3177 | 0.3759 | 0.5420 | 0.3039 | 0.5733 | 0.2605 | 0.2483 | 7.1 | 5.0 |
EDST | 0.6129 | 0.4159 | 0.3283 | 0.5945 | 0.3464 | 0.3453 | 0.6499 | 0.3504 | 0.2746 | 2.8 | 2.1 |
The symbol [bold] indicates the highest value in the same evaluation indicator