Fig. 4.

SVs identified between syntenic groups 2 and group 10 in the different M. roreri isolates. Syntenic group 2 and syntenic group 10 show the largest SV identified among the M. roreri isolates assembled with long reads. a) The dotplots evidence the presence of a translocation event specific of MrB3 and a duplication event specific of MrC26 among the 5 long-read assemblies. b) and c) Raw read alignments confirm the translocation event in MrB3 and evidence that is shared only with the closely related isolate MrP5 using both MrC26 (b) and MrB3 (c) genome assemblies as reference. d) Detailed view of the translocation breakpoint and the effect on the gene content of MrC26 and MrB3.