TABLE 2.
Comparison of methods to identify isotopically labeled genomes a
| Incorporator identification method | False positives | Specificity | Sensitivity | Balanced accuracy |
|---|---|---|---|---|
| qSIP model | 7 | 0.993 | 0.857 | 0.925 |
| ΔBD method | 12 | 0.984 | 0.857 | 0.921 |
| HR-SIP | 9 | 0.991 | 0.571 | 0.781 |
| MW-HR-SIP | 4 | 0.996 | 0.857 | 0.927 |
Evaluations were based on absolute genome abundances obtained by normalizing coverage to internal sequin standards using the sequin approach. Specificity and sensitivity were averaged across the seven treatment conditions.