TABLE 2.
List of the wild-type strains of the RSSC investigated in this study a
| Strain | Phylotype | Species | Plant origin | Country of origin | Genome sequence origin | No. of predicted proteins |
|---|---|---|---|---|---|---|
| GMI1000 | I | R. pseudosolanacearum | Tomato | Guyana | (30) | 5,060 |
| PSS4 | I | R. pseudosolanacearum | Tomato | Taiwan | This work | 5,117 |
| RUN2340 | III | R. pseudosolanacearum | Potato | Madagascar | This work | 5,119 |
| CFBP2957 | IIA | R. solanacearum | Tomato | French West Indies | This work | 4,951 |
| K60 | IIA | R. solanacearum | Tomato | The United States | (33) | 5,081 |
| BA7 | IIA | R. solanacearum | Banana | Grenada | This work | 5,035 |
| UW551 | IIB | R. solanacearum | Geranium | Kenya | (33) | 4,755 |
| MOLK2 | IIB | R. solanacearum | Banana | Philippines | This work | 4,868 |
| PSI07 | IV | R. syzygii | Tomato | Indonesia | (11) | 4,812 |
| R24 | IV | R. syzygii | Clove | Indonesia | This study | 4,879 |
| BDBR229 | IV | R. syzygii | Banana | Indonesia | This study | 4,724 |
a
The Busco quality scores for completeness and contamination of each genome are shown in Fig. S1 at https://github.com/cbaroukh/rssc-metabolic-networksn. The number of proteins was computed from Prokka automatic annotation (25). The novel genome sequences are available in GenBank (Table S1 at https://github.com/cbaroukh/rssc-metabolic-networks).