Table 3.
Pathogenic/likely pathogenic germline BRCA2 variants found in our study.
| HGVSc Nomenclature |
HGVSp Nomenclature |
Effect | Exon | Frequency % (n=36) | Tumor type | Mutation type | Reference |
|---|---|---|---|---|---|---|---|
| 8023A>G | Ile2675Val | I2675V | 18 | 16.67% (6) | OC (5), TNBC (1) | missense | ACMG/ClinVar |
| 6024dupG | Gln2009Alafs*9 | Q2009Afs*9 | 11 | 11.11% (4) | OC (3), BC (HER2- RH+, 1) | inframe insertion | ACMG |
| 9235delG | Val3079Phefs*4 | V3079Ffs*4 | 24 | 8.33% (3) | OC | inframe deletion | ACMG/ClinVar |
| 1797_1801delTTATA | Tyr600Argfs*14 | Y600Rfs*14 | 10 | 5.56% (2) | OC (1), TNBC (1) | inframe deletion | ACMG/ClinVar |
| 3001dupT | Ser1001Phefs*8 | S1001Ffs*8 | 11 | 5.56% (2) | OC | inframe insertion | ACMG/ClinVar |
| 3395_3396delAA | Lys1132Thrfs*11 | K1132Tfs*11 | 11 | 5.56% (2) | OC (1), TNBC (1) | inframe deletion | ACMG |
| 9253dupA | Thr3085Asnfs*26 | T3085Nfs*26 | 24 | 5.56% (2) | OC | inframe insertion | ACMG/ClinVar |
| 658_659delGT | Val220Ilefs*4 | V220Ifs*4 | 8 | 2.78% (1) | OC | inframe deletion | ACMG/ClinVar |
| 1097T>G | Leu366* | L366* | 10 | 2.78% (1) | OC | missense | ACMG/ClinVar |
| 1228A>T | Lys410* | K410* | 10 | 2.78% (1) | OC | missense | ACMG |
| 1310_1313delAAGA | Lys437Ilefs*22 | K437Ifs*22 | 10 | 2.78% (1) | OC | inframe deletion | ACMG/ClinVar |
| del exon 10 | 10 | 2.78% (1) | OC | deletion variant | |||
| 2979G>A | Trp993* | W993* | 11 | 2.78% (1) | TNBC | missense | ACMG/ClinVar |
| 5130_5133delTGTA | Tyr1710* | Y1710* | 11 | 2.78% (1) | OC | inframe deletion | ACMG/ClinVar |
| 5200dupG | Glu1734Glyfs*9 | E1734Gfs*9 | 11 | 2.78% (1) | OC | inframe insertion | ACMG |
| 5303_5304delTT | Leu1768Argfs*5 | L1768Rfs*5 | 11 | 2.78% (1) | OC | inframe deletion | ACMG/ClinVar |
| 5616delA | Val1873* | V1873* | 11 | 2.78% (1) | TNBC | inframe deletion | ACMG/ClinVar |
| 6450dupA | Val2151Serfs*25 | V2151Sfs*25 | 11 | 2.78% (1) | OC | inframe insertion | ACMG |
| 8021dupA | Ile2675Aspfs*6 | I2675Dfs*6 | 18 | 2.78% (1) | BC (HER2- RH+) | inframe insertion | ACMG/ClinVar |
| 8752G>T | Glu2918* | E2918* | 21 | 2.78% (1) | BC (HER2- RH+) | missense | ACMG |
| 9026_9030delATCAT | Tyr3009Serfs*7 | Y3009Sfs*7 | 23 | 2.78% (1) | OC | inframe deletion | ACMG/ClinVar |
| 9077delA | Gln3026Argfs*2 | Q3026Rfs*2 | 23 | 2.78% (1) | OC | inframe deletion | ACMG |