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[Preprint]. 2023 Aug 23:2023.08.22.554358. [Version 1] doi: 10.1101/2023.08.22.554358

Table 1.

List of primers used in the study.

Primer # Sequence Purpose
SD1_M ccgctcggcggcttctaatcgccggtctctagccactgggatcc Forward primer to amplify the backbone of pYG026 plasmid. Overhang sequence from 5’PGAL1 for Gibson assembly
SD2_M cagatccgctagggataacagggtaatatgcatgc Reverse primer to amplify the backbone of pYG026 plasmid.
SD3 ggcgcgccacttctaaataagc Forward primer to amplify the ADH1 terminator region starting from the 20bps between the stop codon of yeGFP and the start of the terminator
SD4 ccctgttatccctagcggatctg Reverse primer to amplify the ADH1 terminator region from the region right outside the terminator so the ADH1 insert has some plasmid background sequence for Gibson assembly
SD5 tatactttaacgtcaaggagatgtctaaaggtgaagaattattcactgg Reverse primer to be used with SD1_M primer to linearize the pYG026 backbone for the purpose of inserting GAL1 promoter upstream of yeGFP. Has overhang sequences from 3’PGAL1
SD6 cgattagaagccgccgagcgg Forward primer to amplify the GAL1 promoter from the pSD01 vector for Gibson assembly
SD7 ctccttgacgttaaagtatagaggtatattaacaattttttgttg Reverse primer to amplify the GAL1 promoter from the pSD01 vector for Gibson assembly
SD8 gcttatttagaagtggcgcgccttacacgttaattcttgcgcttgcgcagg Reverse primer to amplify the yeGFP-mODC CDS from the pSD01 plasmid. Has overhang sequences containing plasmid sequence upstream of 5’TADH1 and from 5’TADH1
SD9 tatactttaacgtcaaggagatgggatcctctaaaggtgaagaattattc Forward primer to amplify the yeGFP-CLN2 CDS from pITGFP89 plasmid. Has overhang sequences from the 3’PGAL1.
SD10 gcttatttagaagtggcgcgccctaagatcttattacttgggtattgcccatac Reverse primer to amplify the yeGFP-CLN2 CDS from pITGFP89. Has overhang sequences containing plasmid sequence upstream of 5’TADH1 and from 5’TADH1
SD16 tatactttaacgtcaaggagatggtctccaaaggtgaagaactgtttacag Forward primer to amplify the yeGFP-mODC CDS from the pSD01 plasmid. Has overhang sequences from the 3’PGAL1
SD23 ggggttccgcgcacatttccc Plasmid specific reverse primer to screen for multiple genomic integration events at the LEU2 –BstEII region.
SD24 ggaggtcgactacgtcgttaaggc Yeast chromosome III specific reverse primer annealing 458 bps downstream of the endogenous LEU2 CDS. used for PCR screen for single genomic integration event.
SD25 cccaacagttgcgcagcctgaatgg Plamisd specific forward primer to be used with either SD23 (for multiple genomic integration) or SD24 (for single genomic integration)
SD26 ccgtaaaaggaaattacatggcgagtgtcacataatagcgacggatccccgggttaattaaggcg BAR1 gene deletion: Forward primer to amplify the His3MX cassette from pFA6-his3MX. Has 43bps of overhang sequences from 214bps upstream of endogenous BAR1 gene.
SD27 gcttgtcgcgtgccagatcggggttcaattccccgtcgcgcgagctcgtttaaactggatggc BAR1 gene deletion: Reverse primer to amplify the His3MX cassette from pFA6-his3MX. Has 40bps of overhang sequences from 200bps downstream of endogenous BAR1 gene.