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Simulated cDNA ONT and PacBio datasets used for pipeline benchmarking.
| Simulation | ONT dataset | PacBio dataset |
|---|---|---|
| Known transcripts | 35,128 | 35,028 |
| ISM transcripts | 5,000 | 5,000 |
| NIC transcripts | 5,000 | 5,000 |
| NNC transcripts | 5,000 | 5,000 |
| Known read count | 18,507,455 | 3,038,634 |
| Novel read count | 1,501,250 | 854,255 |
| No. of short reads | 39,994,086 | 39,996,784 |
| CAGE peaks | 39,198 | 52,295 |
