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[Preprint]. 2023 Aug 26:2023.08.24.554619. [Version 1] doi: 10.1101/2023.08.24.554619

Table 1.

Primer list for RT-PCR

Gene Strand Accession # Sequence(5′-3′) Siza Exon Source
Prox1 s NM_008937 GTA AGA CAT CAC CGC GTG C 218 1 NIH Primer Tool
as TCA TGG TCA GGC ATC ACT GG 2
CD11b (Itgam) s NM_008401 ATG GAC GCT GAT GGC AAT ACC 203 13 MGH Primer Bank ID 668048a1
as TCC CCA TTC ACG TCT CCC A 14
Pdgfrα s NM_011058 AGA GTT ACA CGT TTG AGC TGT C 252 8 MGH Primer Bank 26349287a1
as GTC CCT CCA CGG TAC TCC T 10
-
Myh11 s NM_013607 AAG CTG CGG CTA GAG GTC A 238 33 MGH Primer Bank ID 7305295a1
as CCC TCC CTT TGA TGG CTG AG 34
CD117 (cKit) s NM_021099 CGC CTG CCG AAA TGT ATG ACG 162 21 (Drumm et al., 2018)
as GGT TCT CTG GGT TGG GGT TGC 23
Pdgfrβ s NM_008809 AGC TAC ATG GCC CCT TAT GA 367 16 (Basciani et al., 2004)
as GGA TCC CAA AAG ACC AGA CA 19
CD144 (VE-cadherin) s NM_009868 CTT CCT TAC TGC CCT CAT TGT 313 3 IDT Primer Quest
as CTG TTT CTC TCG GTC CAA GTT 5
Nos3 (eNOS) s NM_008713 ctg cca cct gat cct aac ttg 143 22 IDT Real time primer tool
as cag cca aac acc aaa gtc atg 23
Acta2 (Smooth Muscle Actin) s NM_007392 GAG CTA CGA ACT GCC TGA C 129 7 IDT TaqMan Mm.PT.58.16320644
as CTG TTA TAG GTG GTT TCG TGG A 8
CaV 1.2 exon1b s NM_001159533 ATG GTC AAT GAA AAC ACG AGG ATG 1 (Cheng et al., 2007)
as GGA ACT GAC GGT AGA GAT GGT TGC 234 2
CD34 as NM_001111059 GGT ACA GGA GAA TGC AGG TC 119 2 IDT Mm.PT.58.8626728
s NM_133654 CGT GGT AGC AGA AGT CAA GT 1
Cspg4 (Ng2) as NM_139001 CTT CAC GAT CAC CAT CCT TCC 132 5 IDT Mm.PT.58.29461721
s CCC GAA TCA TTG TCT GTT CCC 6
- - - - - -
Vimentin s NM_011701 CTG TAC GAG GAG GAG ATG CG 249 1 (Li et al., 2016)
as AAT TTC TTC CTG CAA GGA TT 3
Desmin s NM_010043 GTG GAT GCA GCC ACT CTA GC 218 3 MGH Primer Bank ID 33563250a1
as TTA GCC GCG ATG GTC TCA TAC 4
CD146 (Mcam) s NM_023061 CCC AAA CTG GTG TGC GTC TT 220 1 MGH Primer Bank 10566955a1
as GGA AAA TCA GTA TCT GCC TCT CC 3
KLF4 s NM_010637 ATT AAT GAG GCA GCC ACC TG 400 1 (Majesky et al., 2017)
as GGA AGA CGA GGA TGA AGC TG 3
Ly6a (Sca1) s NM_001271416 CTC TGA GGA TGG ACA CTT CT 400 2 (Majesky et al., 2017)
as GGT CTG CAG GAG GAC TGA GC 4
Gli1 s NM_01029 ATC ACC TGT TGG GGA TGC TGG AT 316 8 (Kramann et al., 2015)
as CGT GAA TAG GAC TTC CGA CAG 10
CD29 (Itgb1) s NM_010578 TCG ATC CTG TGA CCC ATT GC 170 14 NIH Primer Tool
as AAC AAT TCC AGC AAC CAC GC 15
CD105 (Endoglin) s NM_007932 TGA GCG TGT CTC CAT TGA CC 416 11 NIH Primer Tool
as GGG GCC ACG TGT GTG AGA A 15
CD44 as NM_009851 CAC CAT TTC CTG AGA CTT GCT 148 19 IDT Mm.PT.58.12084136
s TCT GAT TCT TGC CGT CTG C 18
CD31 (Pecam1) s NM_008816 CTG CCA GTC CGA AAA TGG AAC 218 7 MGH Primer Bank ID 6679273a1
as CTT CAT CCA CTG GGG CTA TC 8
GJC1 (Connexin 45) s NM_008122 GGT AAC AGG AGT TCT GGT GAA 140 2 IDT Mm.PT.58.8383900
as TCG AAA GAC AAT CAG CAC AGT 3
Anoctamin 1 (TMEM16A) s NM_178642 ggc att tgt cat tgt ctt cca g 141 25 IDT Real time primer tool
as tcc tca cgc ata aac agc tc 26
CD45 (Ptprc) s NM_001111316 ATG CAT CCA TCC TCG TCC AC 225 29 NIH Primer Tool
as TGA CTT GTC CAT TCT GGG CG 31
MGH Harvard Primer Bank (Wang and Seed, 2003; Spandidos et al., 2008; Spandidos et al., 2010)