Table 1.

Prediction accuracy of mAb-Patch and the SA/nMI_proxsum/PS method at different false positive rates

mAb	Antigen region	No. antigen residue	No. epitope residue	Method	TP rate at FP rate of 0.05	TP rate at FP rate of 0.1	TP rate at FP rate of 0.15	TP rate at FP rate of 0.2	TP rate at FP rate of 0.25	TP rate at FP rate of 0.3
045-09 2B05	head	238	18	mAb-Patch	0.06∗	0.17∗	0.56∗	0.61∗	0.72∗	0.72∗
				SA/nMIproxsum/PS	0.00	0.00	0.06	0.11	0.22	0.22
047-09 4G02	head	238	18	mAb-Patch	0.22∗	0.33∗	0.56∗	0.61∗	0.67∗	0.67∗
				SA/nMIproxsum/PS	0.11	0.17	0.39	0.39	0.61	0.61
CR-9114	stalk	210	19	mAb-Patch	0.11	0.26	0.53∗	0.68∗	0.74∗	0.84∗
				SA/nMIproxsum/PS	0.32∗	0.32∗	0.42	0.47	0.63	0.74
FI6	stalk	210	19	mAb-Patch	0.06∗	0.18∗	0.47∗	0.76∗	0.82∗	0.82∗
				SA/nMIproxsum/PS	0.00	0.11	0.32	0.47	0.47	0.58

Asterisks (∗) indicate the better method performance.