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. 2023 Sep 4;14:5380. doi: 10.1038/s41467-023-40907-5

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© The Author(s) 2023

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 3 — A The structures of the AD microbial community (ASV data) and the AD physicochemical data are expressed as Bray-Curtis dissimilarity plotted in a dendrogram. Identical samples in each data-type dendrogram are connected with a line and colored corresponding to their process configuration. B The combined table of ASV and physicochemical data underwent principal coordinate analysis and samples were plotted in the first two coordinate dimensions. The variance explained by each dimension is shown as a percent in the axis text. Samples are colored by their process configuration and ellipses sized by the 95% confidence of the centroid of each configuration group are laid in the background. The two-sided PERMANOVA table above the plot shows results of a test between the four configuration groups.