TABLE 3.
Mutations in the primer annealing site for VA3-R in mx (m1a) strains
| Source | Sequence
|
|
|---|---|---|
| VA3-F | VA3-R | |
| Primera | GGTCAAAATGCGGTCATGG | CCATTGGTACCTGTAGAAAC |
| Isolateb | ||
| 003 | GGTCAAAATGCGGTCATGG | CTGTTAGTGCCCGCAGAAAC |
| 013 | GGTCAAAATGCGGTCATGG | CTGTTAGTGCCCGCAGAAAC |
| 026 | GGTCAAAATGCGGTCATGG | CTGTTAGTGTCCGCAGAAAC |
| 031 | GGTCAAAATGCGGTCATGG | CTGTTAGTGCCCGCAGAAAC |
| 049 | GGTCAAAATGCGGTCATGG | CTGTTAGTGCCCGCAGAAAC |
a
Oligonucleotide sequences specific for detection of vacA genotype m1.
b
DNA sequences complementary to the primer annealing sites in the primarily untypeable isolates (m1a) 003 to 049. Nucleotides which differ are in boldface.