TABLE 4.
Nucleotide sequence identity observed in alignments of 785-bp fragments from the vacA divergent midregions and homologous regions in EMBL database sequences
Strain and isolate | % Identity with:
|
|||
---|---|---|---|---|
Hp05676a (m1) | HpCyttoxb (m1) | Hp07145c (m1) | Hp05677d (m2) | |
mx (m1a) | ||||
003 | 89 | 95 | 91 | 74 |
013 | 88 | 96 | 90 | 74 |
026 | 89 | 98 | 91 | 75 |
031 | 88 | 97 | 90 | 75 |
049 | 89 | 98 | 92 | 74 |
Range | 88–89 | 95–98 | 90–92 | 74–75 |
m1 | ||||
050 | 99 | 87 | 95 | 74 |
057 | 94 | 94 | 94 | 74 |
063 | 98 | 87 | 94 | 73 |
092 | 96 | 89 | 95 | 73 |
065 | 97 | 86 | 94 | 72 |
2137 | 99 | 87 | 95 | 72 |
Range | 94–99 | 86–94 | 94–95 | 72–74 |
m2 | ||||
2029 | 89 | 81 | 80 | 97 |
2032 | 78 | 74 | 77 | 96 |
042 | 78 | 79 | 79 | 93 |
Range | 78–89 | 74–81 | 77–80 | 93–97 |