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. 2023 Jun 1;34(9):1547–1559. doi: 10.1681/ASN.0000000000000170

Table 3.

Association of candidate variants with eGFR decline (%/yr)

Variant Characteristics Previously Reported Effect Estimate (Gorski et al.) Cross-Ancestry Estimate from Current Meta-Analysis
Identifier Nearest Gene Chr Position EA OA EAF β a P EAF β b SEM P
rs34882080 UMOD-PDILT 16 20361441 A G 0.82 0.092 3.3×10−62 0.80 −0.27 0.03 7.3×10−24
rs77924615 UMOD-PDILT 16 20392332 G A 0.80 0.099 3.8×10−69 0.78 −0.30 0.03 4.9×10−27
rs10254101 PRKAG2 7 151415536 T C 0.28 0.037 1.8×10−14 0.29 −0.10 0.02 8.2×10−6
rs1028455 SPATA7 14 88829975 T A 0.66 0.024 3.4×10−8 0.65 −0.01 0.02 0.545
rs1458038 FGF5 4 81164723 C T 0.69 0.028 6.9×10−10 0.70 −0.09 0.02 4.1×10−5
rs4930319 OVOL1 11 65555458 C G 0.33 0.028 5.3×10−10 0.35 −0.03 0.02 0.098
rs434215 TPPP 5 699046 A G 0.28 0.032 7.2×10−9 0.30 −0.07 0.02 4.8×10−3
rs28857283 C15ORF54 15 39224711 G A 0.66 0.030 1.3×10−11 0.63 −0.07 0.02 7.5×10−4
rs13095391 ACVR2B 3 38447232 A C 0.50 0.025 4.0×10−8 0.53 −0.03 0.02 0.181
rs9998485 SHROOM3 4 77362445 A G 0.47 0.027 9.8×10−9 0.50 −0.05 0.02 0.014
rs1047891 CPS1 2 211540507 A C 0.29 0.029 1.2×10−9 0.33 −0.03 0.02 0.209
rs2453533 GATM 15 45641225 A C 0.42 0.029 1.7×10−11 0.40 −0.02 0.02 0.412

Because of the differing phenotype definitions between the two studies, a positive regression β from the analysis by Gorski et al. indicates a faster eGFR decline, whereas in our analyses a negative β indicates a faster eGFR decline. EA, effect allele; OA, other allele; EAF, effect allele frequency; β, regression estimate, difference in % decline/yr per additional copy of the effect allele; SEM, standard error of the mean.

a

Difference in −1×eGFR decline, ml/min per 1.72 m2 per year, per copy of the effect allele, per Gorski et al. PMID 35716955.

b

Difference in the relative annual eGFR decline, %/yr, per copy of the effect allele.