Table 1.
JGI Plant Gene Atlas species. Genome annotation versions of 18 diverse plants included in the current release
| Genome | Version | Project | Taxonomy ID | Source |
|---|---|---|---|---|
| Arabidopsis thaliana | TAIR10 | Gene Atlas | 3702 | phytozome.jgi.doe.gov/info/Athaliana_TAIR10 |
| Araport11 | phytozome.jgi.doe.gov/info/Athaliana_Araport11 | |||
| Brachypodium distachyon | v3.1 | Gene Atlas | 5143 | phytozome.jgi.doe.gov/info/Bdistachyon_v3_1 |
| Chlamydomonas reinhardtii | v5.6 | Gene Atlas | 3055 | phytozome.jgi.doe.gov/info/Creinhardtii_v5_6 |
| Eucalyptus grandis | v2.0 | Gene Atlas | 71 139 | phytozome.jgi.doe.gov/info/Egrandis_v2_0 |
| Glycine max | Wm82.a4.v1 | Gene Atlas | 3847 | phytozome.jgi.doe.gov/info/Gmax_Wm82_a4_v1 |
| Kalanchoë fedtschenkoi | v1.1 | Gene Atlas | 63 787 | phytozome.jgi.doe.gov/info/Kfedtschenkoi_v1_1 |
| Lupinus albus | v1.1 | Non-JGI | 3870 | phytozome.jgi.doe.gov/info/Lalbus_v1 |
| Medicago truncatula | Mt4.0v1 | Gene Atlas | 3880 | phytozome.jgi.doe.gov/info/Mtruncatula_Mt4_0v1 |
| Panicum hallii var. filipes | v3.1 | Gene Atlas | 907 226 | phytozome.jgi.doe.gov/info/Phallii_v3_1 |
| Panicum hallii var. hallii | v2.1 | Gene Atlas | 1 504 633 | phytozome.jgi.doe.gov/info/PhalliiHAL_v2_1 |
| Physcomitrium patens | v3.3 | Gene Atlas | 3218 | phytozome.jgi.doe.gov/info/Ppatens_v3_3 |
| Populus trichocarpa | v4.1 | Gene Atlas | 3694 | phytozome.jgi.doe.gov/info/Ptrichocarpa_v4_1 |
| Panicum virgatum | v5.1 | Gene Atlas | 38 727 | phytozome.jgi.doe.gov/info/Pvirgatum_v5_1 |
| Sorghum bicolor | v3.1.1 | Gene Atlas | 4558 | phytozome.jgi.doe.gov/info/Sbicolor_v3_1_1 |
| Sorghum bicolor var Rio | v2.1 | JGI-CSP | 4558 | phytozome.jgi.doe.gov/info/SbicolorRio_v2_1 |
| Sphagnum angustifolium | v1.1 | Gene Atlas | 76 341 | phytozome.jgi.doe.gov/info/Sfallax_v1_1 |
| Setaria italica | v2.2 | Gene Atlas | 4555 | phytozome.jgi.doe.gov/info/Sitalica_v2_2 |
| Setaria viridis | v2.1 | Gene Atlas | 4556 | phytozome.jgi.doe.gov/info/Sviridis_v2_1 |