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. 2023 Jul 18;51(16):8413–8433. doi: 10.1093/nar/gkad581

Table 2.

PCR amplification primer to capture NFKB2 promoter interacting regions

Primer name Condition Sequence
For-P5-illuminaSeq-NFκB2-NlaIII ALL AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCTCGTGACGCACGGAAACGTC
Rev-P7-indexT1-NFκB2-DpnII DMSO rep 1 CAAGCAGAAGACGGCATACGAGATAACGTGATGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCGCCTAACGCTTGGCTTTCTC
Rev-P7-indexT2-NFκB2-DpnII DNR rep 1 CAAGCAGAAGACGGCATACGAGATAAACATCGGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCGCCTAACGCTTGGCTTTCTC
Rev-P7-indexT3-NFκB2-DpnII ML-792 rep 1 CAAGCAGAAGACGGCATACGAGATATGCCTAAGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCGCCTAACGCTTGGCTTTCTC
Rev-P7-indexT4-NFκB2-DpnII ML-792-DNR rep 1 CAAGCAGAAGACGGCATACGAGATAGTGGTCAGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCGCCTAACGCTTGGCTTTCTC
Rev-P7-indexT5-NFκB2-DpnII DMSO rep 2 CAAGCAGAAGACGGCATACGAGATACCACTGTGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCGCCTAACGCTTGGCTTTCTC
Rev-P7-indexT6-NFκB2-DpnII DNR rep 2 CAAGCAGAAGACGGCATACGAGATACATTGGCGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCGCCTAACGCTTGGCTTTCTC
Rev-P7-indexT7-NFκB2-DpnII ML-792 rep 2 CAAGCAGAAGACGGCATACGAGATCAGATCTGGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCGCCTAACGCTTGGCTTTCTC
Rev-P7-indexT8-NFκB2-DpnII ML-792-DNR rep 2 CAAGCAGAAGACGGCATACGAGATCATCAAGTGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCGCCTAACGCTTGGCTTTCTC
Rev-P7-indexT9-NFκB2-DpnII DMSO rep 3 CAAGCAGAAGACGGCATACGAGATCGCTGATCGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCGCCTAACGCTTGGCTTTCTC
Rev-P7-indexT10-NFκB2-DpnII DNR rep 3 CAAGCAGAAGACGGCATACGAGATACAAGCTAGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCGCCTAACGCTTGGCTTTCTC
Rev-P7-indexT11-NFκB2-DpnII ML-792 rep 3 CAAGCAGAAGACGGCATACGAGATCTGTAGCCGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCGCCTAACGCTTGGCTTTCTC
Rev-P7-indexT12-NFκB2-DpnII ML-792-DNR rep 3 CAAGCAGAAGACGGCATACGAGATAGTACAAGGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCGCCTAACGCTTGGCTTTCTC