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. 2023 Sep 7;6:188. doi: 10.1038/s42004-023-00991-6

Table 1.

The performance of the top 20 out of 47 server predictors in terms of the average GDT-TS of the top1 models (model 1) submitted by the server predictors for all 94 domains, 47 TBM domains and 47 FM and FM/TBM domains.

Predictor ID Server name Avg. GDT-TS on 94 domains Avg. GDT-TS on 47 TBM domains Avg. GDT-TS on 47 FM or FM/TBM domains
62 UM-TBM40 0.8433 0.9027 0.784
229 Yang-server41 0.8397 0.8944 0.785
475 MULTICOM_refine42 0.7964 0.8944 0.6983
120 MULTICOM_egnn42 0.793 0.886 0.6999
158 MULTICOM_deep42 0.7922 0.8866 0.6977
86 MULTICOM_qa42 0.7917 0.8865 0.6969
35 Manifold-E43 0.7871 0.8821 0.692
166 RaptorX44 0.7808 0.8834 0.6782
288 DFolding-server45 0.7792 0.8755 0.6829
383 server_12446 0.7713 0.8866 0.6561
188 GuijunLab-DeepDA47 0.7646 0.8831 0.6462
298 MUFold48 0.7629 0.8783 0.6475
98 GuijunLab-Assembly49 0.7604 0.8746 0.6461
462 MultiFOLD50 0.7582 0.8767 0.6397
282 GuijunLab-Threader51 0.7578 0.869 0.6466
125 UltraFold_Server 0.7561 0.8782 0.6341
446 Shennong 0.7558 0.8732 0.6383
353 hFold52 0.7482 0.8635 0.633
466 ColabFold53 0.7352 0.796 0.6744
270 NBIS-AF2-standard54 0.7285 0.8258 0.6312

NBIS-AF2-standard is the standard AlphaFold2 predictor, which ranks 20th in terms of the average GDT-TS score on the 94 domains. MULTICOM_refine ranks 3rd.