Table 2.
Isolates from other studies used in the phylogenetic analyses.
| Species | Isolate numbersa | Host | Location | Collector | GenBank accession numbersb |
|||
|---|---|---|---|---|---|---|---|---|
| ITS | tef1 | tub2 | rpb2 | |||||
| Botryosphaeria agaves | CBS 133992 = MFLUCC11-0125 * | Agave sp. | Thailand | R. Phookamsak | JX646791 | JX646856 | JX646841 | – |
| MFLUCC 10-0051 | Agave sp. | Thailand | P. Chomnunti | JX646790 | JX646855 | JX646840 | – | |
| Botryosphaeria corticis | CBS 119047 * | Vaccinium corymbosum | USA | P.V. Oudemans | DQ299245 | EU017539 | – | – |
| ATCC 22927 | Vaccinium sp. | USA | R.D. Millholland | DQ299247 | EU673291 | EU673108 | – | |
| Botryosphaeria dothidea | CBS 115476 = CMW 8000 * | Prunus sp. | Switzerland | B. Slippers | AY236949 | AY236898 | AY236927 | EU339577 |
| CBS 110302 | Vitis vineifera | Portugal | A.J.L. Phillips | AY259092 | AY573218 | EU673106 | – | |
| CBS 145971 = CPC 29048 | Grevillea sp. | Australia | P.W. Crous | MT587332 | MT592034 | MT592470 | – | |
| Botryosphaeria fabicerciana | CBS 127194 = CMW 27094 * | Eucalyptus sp. | China | M.J. Wingfield | HQ332197 | HQ332213 | KF779068 | MF410137 |
| CERC 2948 | Eucalyptus sp. | China | M.J. Wingfield | KX277983 | KX278088 | KX278193 | MF410132 | |
| Botryosphaeria kuwatsukai | CBS 135219 = PG2 * | Malus domestica | China | C.S. Wang | KJ433388 | KJ433410 | – | – |
| LSP5 | Pyrus sp. | China | C.S. Wang | KJ433395 | KJ433417 | – | – | |
| Botryosphaeria qingyuanensis | CERC 2946 = CGMCC 3.18742 * | Eucalyptus hybrid | China | S.F. Chen & G.Q. Li | KX278000 | KX278105 | KX278209 | MF410151 |
| CERC 2947 = CGMCC 3.18744 | Eucalyptus hybrid | China | S.F. Chen & G.Q. Li | KX278001 | KX278106 | KX278210 | MF410152 | |
| Botryosphaeria ramosa | CBS 122069 = CMW 26167 * | Eucalyptus camaldulensis | Australia | T.I. Burgess | EU144055 | EU144070 | KF766132 | – |
| CGMCC 3.18006 | Myrtaceae | China | – | KX197072 | KX197092 | KX197099 | – | |
| Botryosphaeria scharifii | CBS 124703 = IRAN 1529C * | Mangifera indica | Iran | J. Abdollahzadeh | JQ772020 | JQ772057 | – | – |
| CBS 124702 = IRAN 1543C | Mangifera indica | Iran | J. Abdollahzadeh & A. Javadi | JQ772019 | JQ772056 | – | – | |
| Diplodia africana | CBS 120835 = CPC 5908 * | Prunus persica | South Africa | U. Damm | KF766155 | KF766397 | KF766129 | – |
| STE-U 5946 | Prunus persica | South Africa | U. Damm | EF445344 | EF445383 | – | – | |
| Diplodia afrocarpi | CBS 131681 = CMW 35506 | Afrocarpus falcatus, healthy twigs | South Africa | E.M. Cruywagen | MT587333 | MT592035 | MT592471 | – |
| Diplodia agrifolia | CBS 124.30 | Ulmus sp. | USA | – | KX464087 | KX464557 | KX464783 | KX463953 |
| Diplodia allocellula | CBS 130408 = CMW 36468 * | Acacia karroo | South Africa | F. Jami & M. Gryzenhout | JQ239397 | JQ239384 | JQ239378 | – |
| CMW 36470 | Acacia karroo | South Africa | F. Jami & M. Gryzenhout | JQ239399 | JQ239386 | JQ239380 | – | |
| Diplodia arengae | MFLU 17-2769 = XTBG28 * | Arenga hookeriana | China | D.N. Wanasinghe | MG762771 | MG762774 | MG783039 | – |
| Diplodia bulgarica | CBS 124254 * | Malus sylvestris | Bulgaria | S.G. Bobev | GQ923853 | GQ923821 | – | – |
| CBS 124135 | Malus sylvestris | Bulgaria | S.G. Bobev | GQ923852 | GQ923820 | – | – | |
| Diplodia citricarpa | CBS 124715 = CJA 131 = IRAN 1578C * | Citrus sp., twigs | Iran | J. Abdollahzadeh & A. Javadi | KF890207 | KF890189 | KX464784 | – |
| Diplodia corticola | CBS 112549 = CAP 134 * | Quercus suber | Portugal | A. Alves | AY259100 | AY573227 | DQ458853 | – |
| CBS 112546 | Quercus ilex | Spain | – | AY259090 | EU673310 | EU673117 | KX463954 | |
| Diplodia crataegicola | MFLU 15-1311 * | Crataegus sp. | Italy | – | KT290244 | KT290248 | KT290246 | – |
| Diplodia cupressi | CBS 168.87 * | Cupressus sempervirens | Israel | Z. Solel | DQ458893 | DQ458878 | DQ458861 | – |
| CBS 261.85 | Cupressus sempervirens | Israel | Z. Solel | DQ458894 | DQ458879 | DQ458862 | – | |
| Diplodia eriobotryicola | CBS 140851 = BN-21 * | Eriobotrya japonica | Spain | E. Gonzalez-Domýnguez | KT240355 | KT240193 | MG015806 | – |
| Diplodia estuarina | CMW 41363 | Rhizophora mucronata | South Afric | J.A. Osorio & Jol. Roux. | KP860829 | KP860674 | KP860752 | – |
| CMW 41230 | Rhizophora mucronata | South Afric | J.A. Osorio & Jol. Roux. | KP860830 | KP860675 | KP860753 | – | |
| Diplodia fraxini | CBS 136010 * | Fraxinus angustifolia | Portugal | A. Deidda | KF307700 | KF318747 | MG015807 | – |
| CBS 136011 | Fraxinus angustifolia | Italy | B.T. Linaldeddu | KF307711 | KF318748 | MG015808 | – | |
| Diplodia galiicola | MFLU15-1310 * | Galium sp. | Italy | E. Camporesi | KT290245 | KT290249 | KT290247 | – |
| Diplodia gallae | CBS 211.25 | Quercus sp., fruit | – | – | KX464090 | KX464564 | KX464795 | – |
| CBS 212.25 | Quercus sp., gall | – | – | KX464091 | KX464565 | KX464796 | – | |
| Diplodia malorum | CBS 124130 * | Malus sylvestris | Portugal | A.J.L. Phillips | GQ923865 | GQ923833 | – | – |
| BN-37 | Eriobotrya japonica | Spain | – | KT240360 | KT240198 | – | – | |
| Diplodia mutila | CBS 112553 = CAP 062 * | Vitis vinifera | Portugal | A.J.L. Phillips | AY259093 | AY573219 | KY554743 | – |
| Diplodia neojuniperi | CPC 22753 = B0031 * | Juniperus chinensis | Thailand | T. Trakunyingcharoen | KM006431 | KM006462 | – | – |
| CPC 22754 = B0032 | Juniperus chinensis | Thailand | T. Trakunyingcharoen | KM006432 | KM006463 | – | – | |
| Diplodia olivarum | CBS 121887 = CAP 254 * | Olea europaea | Italy | C. Lazzizera | EU392302 | EU392279 | HQ660079 | – |
| IMI 390972 | Carob tree | Italy | – | HM028640 | HQ660078 | HQ660080 | – | |
| Diplodia pseudoseriata | CBS 124906 * | Blepharocalyx salicifolius | Uruguay | C. Pérez | EU080927 | EU863181 | MG015820 | – |
| Diplodia quercivora | CBS 133852 * | Quercus canariensis | Tunisia | B. T. Linaldeddu | JX894205 | JX894229 | MG015821 | – |
| MEAN 1017 | Quercus suber | Portugal | H. Braganca | KU311198 | KU311201 | – | – | |
| Diplodia rosulata | CBS 116470 * | Prunus africana | Ethiopia | A. Gure | EU430265 | EU430267 | EU673132 | – |
| CBS 116472 | Prunus africana | Ethiopia | A. Gure | EU430266 | EU430268 | EU673131 | – | |
| Diplodia sapinea | CBS 393.84 * | Pinus nigra | Netherlands | H.A. van der Aa | DQ458895 | DQ458880 | DQ458863 | – |
| CBS109726 = CMW 04880 | Pinus patula | South Africa | M.J. Wingfield | KX464094 | KX464568 | KX464800 | KX463956 | |
| Diplodia scrobiculata | CBS 118110 * | Pinus resinosa | USA | M.A. Palmer | AY253292 | AY624253 | AY624258 | KX463959 |
| Diplodia seriata | CBS 112555 = CAP 063 * | Vitis vinifera | Italy | A.J.L. Phillips | AY259094 | AY573220 | DQ458856 | – |
| CBS 117.82 | Rubus sp., dead stem | Italy | H.A. van der Aa | KX464108 | KX464598 | KX464834 | KX463964 | |
| Diplodiasp. 1 | CBS 678.88 | Quercus suber | Spain | J. Luque | AY259104 | GU799459 | GU799458 | – |
| UCD1275So | Grape vine | USA | – | GU799471 | GU799468 | GU799465 | – | |
| Diplodia subglobosa | CBS 124133 = JL 453 * | Lonicera nigra | Spain | J. Luque | GQ923856 | GQ923824 | MT592576 | – |
| CBS 124132 = JL 375 | Fraxinus excelsior | Spain | J. Luque | DQ458887 | DQ458871 | DQ458852 | – | |
| Diplodia tsugae | CBS 418.64 = IMI 197143 * | Tsuga heterophylla | Canada | A. Funk | DQ458888 | DQ458873 | DQ458855 | – |
| Dothiorella acacicola | CBS 141295 = CPC 26349 * | Acacia mearnsii | France | P.W. Crous & M.J. Wingfield | KX228269 | KX228376 | – | – |
| Dothiorella acericola | KUMCC 18-0137 * | Acer palmatum, dead hanging twigs | China | R. Phookamsak | MK359449 | MK361182 | – | – |
| HNXX032 | Ziziphus jujuba, branch | China | R. Zang | KY385661 | KY393212 | KY393178 | ||
| Dothiorella alpina | CGMCC 3.18001 * | Platycladus orientalis | China | W. He & J.R. Wu; det. Y. Zhang | KX499645 | KX499651 | – | – |
| Dothiorella brevicollis | CBS 130411 = CMW 36463 * | Acacia karroo | South Africa | F. Jami & M. Gryzenhout | JQ239403 | JQ239390 | JQ239371 | – |
| CMW 36464 | Acacia karroo | South Africa | F. Jami & M. Gryzenhout | JQ239404 | JQ239391 | JQ239372 | – | |
| Dothiorella capri-amissi | CBS 121763 = CMW 25403 * | Acacia erioloba | South Africa | F.J.J. van der Walt & G.J. Marais | EU101323 | EU101368 | KX464850 | – |
| CMW 25404 | Acacia erioloba | South Africa | F.J.J. van der Walt & G.J. Marais | EU101324 | EU101369 | – | – | |
| Dothiorella casuarini | CBS 120688 = CMW 4855 * | Casuarina sp. | Australia | M.J. Wingfield | DQ846773 | DQ875331 | – | KX463970 |
| CBS 120690 = CMW 4857 | Casuarinasp. | Australia | M.J. Wingfield | DQ846774 | DQ875333 | – | – | |
| Dothiorella citricola | CBS 124729 = ICMP 16828 * | Citrus sinensis | New Zealand | S.R. Pennycook, P.R. Johnston & B.C. Paulus | EU673323 | EU673290 | KX464853 | KX463971 |
| CBS 124728 = ICMP 16827 | Citrus sinensis | New Zealand | S.R. Pennycook, P.R. Johnston & B.C. Paulus | EU673322 | EU673289 | KX464852 | – | |
| Dothiorella diospyricola | CBS 145972 = CPC 34653 * | Diospyros mespiliformis | South Africa | P.W. Crous | MT587398 | MT592110 | MT592581 | |
| Dothiorella dulcispinae | CBS 130413 = CMW 36460 * | Acacia karroo | South Africa | F. Jami & M. Gryzenhout | JQ239400 | JQ239387 | JQ239373 | – |
| CMW 36462 | Acacia karroo | South Africa | F. Jami & M. Gryzenhout | JQ239402 | JQ239389 | JQ239375 | – | |
| Dothiorella eriobotryae | CBS 140852 = CPC 29679 = BN 81 * | Eriobotrya japonica, branch canker | Spain | E. Gonzalez-Domýnguez | KT240287 | KT240262 | MT592582 | – |
| Dothiorella heterophyllae | CMW46458 | Acacia heterophylla | La Réunion | M.J. Wingfield | MN103794 | MH548348 | MH548324 | – |
| Dothiorella iranica | CBS 124722 = IRAN 1587C * | Olea europea | Iran | A. Javadi | KC898231 | KC898214 | KX464856 | – |
| MFLUCC 15-0656 | Paliurus | Italy | E. Camporesi | KX765302 | KX765303 | – | – | |
| Dothiorella koae | CMW48017 | Acacia heterophylla | La Réunion | M.J. Wingfield | MH447652 | MH548338 | MH548327 | – |
| Dothiorella lampangensis | MFLUCC 18-0232 * | Rutaceae, fallen fruit pericarp | Thailand | S.C. Jayasiri | MK347758 | MK340869 | MK412874 | |
| Dothiorella longicollis | CBS 122068 = CMW 26166 * | Lysiphyllum cunninghamii | Australia | T.I. Burgess & M.J. Wingfield | EU144054 | EU144069 | KF766130 | KX463972 |
| CBS 122066 = CMW 26166 | Terminalia sp. | Australia | T.I. Burgess & M.J. Wingfield | EU144052 | EU144067 | KX464857 | – | |
| Dothiorella magnoliae | CFCC 51563 * | Magnolia grandiflora | China | C.J. You | KY111247 | KY213686 | – | |
| CFCC 51564 | Magnolia grandiflora | China | C.J. You | KY111248 | KY213687 | – | ||
| Dothiorella mangifericola | CBS 124727 = IRAN 1584C * | Mangifera indica | Iran | J. Abdollahzadeh & A. Javadi | KC898221 | KC898204 | – | KX463973 |
| IRAN 1545C | Mangifera indica | Iran | J. Abdollahzadeh & A. Javadi | KC898223 | KC898206 | – | – | |
| Dothiorella moneti | MUCC 505 = WAC 13154 * | Acacia rostellifera | Australia | K.M. Taylor | EF591920 | EF591971 | EF591954 | – |
| MUCC 507 | Acacia rostellifera | Australia | K.M. Taylor | EF591922 | EF591973 | EF591956 | – | |
| Dothiorella plurivora | CBS 124724 = IRAN 1557C * | Citrus sp. | Iran | J. Abdollahzadeh & A. Javadi | KC898225 | KC898208 | KX464874 | – |
| CBS 124725 | Prunus armeniaca | Iran | J. Abdollahzadeh & A. Javadi | KC898225 | KC898213 | KX464875 | – | |
| Dothiorella pretoriensis | CBS 130404 = CMW 36480 * | Acacia karroo | South Africa | F. Jami & M. Gryzenhout | JQ239405 | JQ239392 | JQ239376 | – |
| CMW 36481 | Acacia karroo | South Africa | F. Jami & M. Gryzenhout | JQ239406 | JQ239393 | JQ239377 | – | |
| Dothiorella prunicola | CBS 124723 = CAP 187 * | Prunus dulcis | Portugal | E. Diogo | EU673313 | EU673280 | – | – |
| Dothiorella reunionis | CMW46457 * | Acacia heterophylla | La Réunion | M.J. Wingfield | MH447649 | MH548347 | – | – |
| Dothiorella santali | MUCC 509 = WAC 13155 * | Santalum acuminatum | Australia | K.M. Taylor | EF591924 | EF591975 | EF591958 | – |
| MUCC 508 | Santalum acuminatum | Australia | K.M. Taylor | EF591923 | EF591974 | EF591957 | – | |
| Dothiorella sarmentorum | IMI 63581b * | Ulmus sp. | England | E.A. Ellis | AY573212 | AY573235 | – | – |
| CBS 115038 | Malus pumila | Netherlands | A.J.L. Phillips | AY573206 | AY573223 | EU673101 | – | |
| Dothiorella sp. 1 | CBS 121783 = CMW 25432 = CAMS 1187 | Acacia mearnsii | South Africa | F.J.J. van der Walt & R.N. Heath | EU101333 | EU101378 | KX464859 | – |
| CBS 121784 = CMW 25430 = CAMS 1185 | Acacia mearnsii | South Africa | F.J.J. van der Walt & R.N. Heath | EU101331 | EU101376 | KX464860 | – | |
| Dothiorella striata | CBS 124731= ICMP 16824 * | Citrus sinensis | New Zealand | S.R. Pennycook, P.R. Johnston & B.C. Paulus | EU673321 | EU673288 | EU673143 | KX463976 |
| CBS 124730 = ICMP 16819 | Citrus sinensis | New Zealand | S.R. Pennycook, P.R. Johnston & B.C. Paulus | EU673320 | EU673287 | EU673142 | – | |
| Dothiorella tectonae | MFLUCC 12-0382 = MD-2014 * | Tectona grandis | Thailand | M. Doilom | KM396899 | KM409637 | KM510357 | – |
| Dothiorella thailandica | MFLUCC 11-0438 * | Bamboo culm | Thailand | D.Q. Dai | JX646796 | JX646861 | JX646844 | – |
| Dothiorella thripsita | CBS 125445 = BRIP 51876 * | Acacia harpophylla | Australia | D.J. Tree & C.E.C. Tree | FJ824738 | KJ573639 | KJ577550 | KX463977 |
| Dothiorella ulmacea | CBS 138855 = CPC 24416 * | Ulmus laevis | Germany | R.K. Schumacher | KR611881 | KR611910 | KR611909 | – |
| CPC 24945 | Ulmus laevis | Germany | R.K. Schumacher | KR611882 | KR857697 | – | – | |
| Dothiorella uruguayensis | CBS 124908 = CMW 26763 =UY672 * | Hexachlamis edulis | Uruguay | C.A. Pérez | EU080923 | EU863180 | KX464886 | – |
| Dothiorella vinea-gemmae | DAR 81012 = B116-3 * | Vitis vinifera | Australia | N. Wunderlich | KJ573644 | KJ573641 | – | – |
| Dothiorella viticola | CBS 117009 * | Vitis vinifera cv. Garnatxa Negra | Spain | J. Luque & S. Martos | AY905554 | AY905559 | EU673104 | DQ677985 |
| GAR09 | Vitis sp. | French | – | KT595694 | KX098285 | KT595695 | – | |
| Dothiorella yunnana | CGMCC 3.17999 * | Camellia sp. | China | W. He & J.R. Wu; det. Y. Zhang | KX499643 | KX499649 | – | – |
| CGMCC 3.18000 | Camellia sp. | China | W. He & J.R. Wu; det. Y. Zhang | KX499644 | KX499650 | – | – | |
| Lasiodiplodia acaciae | CBS 136434 = CPC 20820 * | Acacia sp., leaf spot | Indonesia | M.J. Wingfield | MT587421 | MT592133 | MT592613 | MT592307 |
| Lasiodiplodia americana | CERC 1961 = CFCC 50065 * | Pistachia vera | USA | T.J. Michailides | KP217059 | KP217067 | KP217075 | MF410161 |
| CERC 1960 = CFCC 50064 | Pistachia vera | USA | T.J. Michailides | KP217058 | KP217066 | KP217074 | MF410162 | |
| Lasiodiplodia aquilariae | CGMCC 3.18471 * | Aquilaria crassna | Laos | X. Sun | KY783442 | KY848600 | – | KY848562 |
| Lasiodiplodia avicenniae | CMW 41467 * | Avocennia marina | South Africa | J.A. Osorio & J. Roux | KP860835 | KP860680 | KP860758 | KU587878 |
| LAS 199 | Avocennia marina | South Africa | J.A. Osorio & J. Roux | KU587957 | KU587947 | KU587868 | KU587880 | |
| Lasiodiplodia brasiliense | CMM 4015 * | Mangifera indica | Brazil | M.W. Marques | JX464063 | JX464049 | – | – |
| IBL 344 | Adansonia madagascariensis | Madagascar | – | KT151808 | KT151802 | KT151805 | – | |
| Lasiodiplodia bruguierae | CMW 41470* | Bruguiera gymnorrhiza | South Africa | J.A. Osorio & J. Roux | KP860833 | KP860678 | KP860756 | KU587875 |
| CMW 41614 | Bruguiera gymnorrhiza | South Africa | J.A. Osorio & J. Roux | KP860834 | KP860679 | KP860757 | KU587877 | |
| Lasiodiplodia cinnamomi | CFCC 51997 * | Cinnamomum camphora | China | N. Jiang | MG866028 | MH236799 | MH236797 | MH236801 |
| CFCC 51998 | Cinnamomum camphora | China | N. Jiang | MG866029 | MH236800 | MH236798 | MH236802 | |
| Lasiodiplodia citricola | CBS 124707 = IRAN 1522C * | Citrus sp. | Iran | J. Abdollahzadeh & A. Javadi | GU945354 | GU945340 | KP872405 | KU696351 |
| CBS124706 = IRAN 1521C | Citrus sp. | Iran | A. Shekari | GU945353 | GU945339 | KP872406 | KU696350 | |
| Lasiodiplodia crassispora | CBS 118741 = WAC12533 * | Santalum album | Australia | T.I. Burgess & B. Dell | DQ103550 | EU673303 | KU887506 | KU696353 |
| CMM 4585 | – | – | – | MG954354 | MG979520 | MG979552 | MG979561 | |
| Lasiodiplodia euphorbicola | CMM 3609 * | Jatropha curcas | Brazil | A.R. Machado & O.L. Pereira | KF234543 | KF226689 | KF254926 | – |
| CMW 33350 | Adansonia digitata | Botswana | – | KU887149 | KU887026 | KU887455 | KU696346 | |
| Lasiodiplodia gilanensis | CBS 124704 = IRAN1523C= UCCE 940B * | Citrus sp., fallen twigs | Iran | J. Abdollahzadeh & A. Javadi | KX906851 | KX906853 | KX906849 | KU696357 |
| CBS 124705 = IRAN 1501C | Citrus sp., fallen twigs | Iran | J. Abdollahzadeh & A. Javadi | GU945352 | GU945341 | KP872412 | KU696356 | |
| Lasiodiplodia gonubiensis | CBS 115812 = CMW 14077 * | Syzygium cordatum | South Africa | D. Pavlic | AY639595 | DQ103566 | DQ458860 | KU696359 |
| CMW 46621 = MTU 56 | Syzygium cordatum | South Africa | D. Pavlic | KY052944 | KY024623 | KY000126 | – | |
| Lasiodiplodia gravistriata | CMM 4564 * | Anacardium humile | Brazil | M.S.B. Netto | KT250949 | KT250950 | – | – |
| CMM 4565 | Anacardium humile | Brazil | M.S.B. Netto | KT250947 | KT266812 | – | – | |
| Lasiodiplodia hormozganensis | CBS 124709 = IRAN 1500C * | Olea sp. | Iran | J. Abdollahzadeh & A. Javadi | GU945355 | GU945343 | KP872413 | KU696361 |
| CBS 124708 = IRAN 1498C | Mangifera indica | Iran | J. Abdollahzadeh & A. Javadi | GU945356 | GU945344 | KP872414 | KU696360 | |
| Lasiodiplodia indica | IBP 1 * | Angiospermous tree | India | I.B. Prasher & G. Singh | KM376151 | – | – | – |
| Lasiodiplodia iranensis | CBS 124710 = IRAN 1520C * | Salvadora persica | Iran | J. Abdollahzadeh & A. Javadi | GU945348 | GU945336 | KU887516 | KU696363 |
| CBS 124711 = IRAN 1502C = CMM 4603 | Juglans sp. | Iran | A. Javadi | GU945347 | GU945335 | MG979537 | – | |
| Lasiodiplodia laeliocattleyae | CBS 167.28 * | Laeliocattleya | Italy | C. Sibilia | KU507487 | KU507454 | – | – |
| CMM 4724 | Vitis vinifera | Brazil | – | MG954343 | MG979508 | MG979541 | – | |
| Lasiodiplodia lignicola | CBS 134112= MFLUCC 11-0435 * | Dead wood | Thailand | A.D. Ariyawansa | JX646797 | KU887003 | KT852958 | KU696364 |
| Lasiodiplodia macrospora | CMM 3833 * | Jatropha curcas | Brazil | A.R. Machado & O.L. Pereira | KF234557 | KF226718 | KF254941 | – |
| Lasiodiplodia mahajangana | CBS 124925 = CMW 27801 * | Terminalia catappa | Madagascar | J. Roux | FJ900595 | FJ900641 | FJ900630 | KU696365 |
| CMW 27818 | Terminalia catappa | Madagascar | J. Roux | FJ900596 | FJ900642 | FJ900631 | – | |
| Lasiodiplodia margaritacea | CBS 122519 = CMW 26162 * | Adansonia gibbosa | Australia | T.I. Burgess & M.J. Wingfield | EU144050 | EU144065 | KX464903 | KU696367 |
| CBS 122065 | Adansonia gibbosa | Australia | T.I. Burgess & M.J. Wingfield | EU144051 | EU144066 | – | – | |
| Lasiodiplodia mediterranea | CBS 137783 * | Holm oak | Italy | B.T. Linaldeddu | KJ638312 | KJ638331 | KU887521 | KU696368 |
| CBS137784 | Grapevine | Italy | S. Serra | KJ638311 | KJ638330 | KU887522 | KU696369 | |
| Lasiodiplodia microconidia | CGMCC 3.18485 * | Aquilaria crassna | Laos | X. Sun | KY783441 | KY848614 | – | KY848561 |
| Lasiodiplodia parva | CBS 456.78 * | Cassava-field soil | Colombia | O. Rangel | EF622083 | EF622063 | KU887523 | KU696372 |
| CBS 494.78 | Cassava-field soil | Colombia | O. Rangel | EF622084 | EF622064 | EU673114 | KU696373 | |
| Lasiodiplodia plurivora | CBS 120832 = STE-U5803 * | Prunus salicina | South Africa | F. Halleen | EF445362 | EF445395 | KP872421 | KU696374 |
| CBS 121103 = STE-U4583 | Vitis vinifera | South Africa | F. Halleen | AY343482 | EF445396 | KP872422 | KU696375 | |
| Lasiodiplodia pontae | CMW 1277 = IBL12 * | Spondias purpurea | Brazil | J.S. Lima & F.C.O. Freire | KT151794 | KT151791 | KT151797 | – |
| Lasiodiplodia pseudotheobromae | CBS 116459 * | Gmelina arborea | Costa Rica | J. Carranza & Velásquez | EF622077 | EF622057 | EU673111 | KU696376 |
| CMM 3887 | Jatropha curcas | Brazil | A.R. Machado | KF234559 | KF226722 | KF254943 | – | |
| Lasiodiplodia rubropurpurea | CBS 118740 = CMW 14700 = WAC 12535 * | Eucalyptus grandis | Australia | T.I. Burgess & G. Pegg | DQ103553 | DQ103571 | KU887529 | KU696380 |
| WAC 12536 = CMW 15207 | Eucalyptus grandis | Australia | T.I. Burgess & G. Pegg | DQ103554 | DQ103572 | KP872425 | KU696381 | |
| Lasiodiplodia subglobosa | CMM 3872 * | Jatropha curcas | Brazil | A.R. Machado & O.L. Pereira | KF234558 | KF226721 | KF254942 | – |
| CMM 4046 | Jatropha curcas | Brazil | A.R. Machado & O.L. Pereira | KF234560 | KF226723 | KF254944 | – | |
| Lasiodiplodia syzygii | MFLUCC 19-0219.1 = GUCC 9719.1 * | Syzygium samarangense | Thailand | Q. Zhang | MT990531 | MW016943 | MW014331 | – |
| GUCC 9719.3 | Syzygium samarangense | Thailand | Q. Zhang | MW081992 | MW087102 | MW087105 | – | |
| Lasiodiplodia thailandica | CPC 22795 * | Mangifera indica | Thailand | T. Trakunyingcharoen | KJ193637 | KJ193681 | – | – |
| BJFU DZP160123-13 | Albizia chinensis | China | Z.P. Dou & Z.C. Liu | KY676789 | KY676798 | KY751301 | KY751298 | |
| Lasiodiplodia theobromae | CBS 164.96 * | fruit along coral reef coast | Papua New Guinea | A. Aptroot | AY640255 | AY640258 | KU887532 | KU696383 |
| CBS 111530 | Leucospermum sp. | USA | J.E. Taylor | EF622074 | EF622054 | KU887531 | KU69638 | |
| CBS 124.13 | – | USA | J.J. Taubenhaus | DQ458890 | DQ458875 | DQ458858 | KY472887 | |
| Lasiodiplodia tropica | CGMCC 3.18477 * | Aquilaria crassna | Laos | X. Sun | KY783454 | KY848616 | KY848540 | KY848574 |
| Lasiodiplodia venezuelensis | CBS 118739 = CMW 13511 = WAC 12539 * | Acacia mangium | Venezuela | S. Mohali | DQ103547 | EU673305 | KU887533 | KU696384 |
| CBS 129757 | Acacia mangium | Venezuela | S. Mohali | JX545102 | JX545122 | JX545142 | – | |
| Lasiodiplodia viticola | CBS 128313 = UCD 2553AR * | Vitis vinifera | USA | R.D. Cartwright & W.D. Gubler | HQ288227 | HQ288269 | HQ288306 | KU696385 |
| CBS 128315 = UCD 2604MO | Vitis vinifera | USA | K. Striegler & W.D. Gubler | HQ288228 | HQ288270 | HQ288307 | KU696386 | |
| Lasiodiplodia vitis | CBS 124060 * | Vitis vinifera | Italy | S. Burruano | KX464148 | KX464642 | KX464917 | – |
| Neodeightonia licuriensis | COAD 1780 * | Syagrus coronata | Brazil | O.L. Pereira | KP165429 | KP165430 | KP165431 | – |
| Neodeightonia microspora | MFLUCC 11-0483 | bamboo | Thailand | D.Q. Dai | KU940110 | – | – | – |
| MFLUCC 11-0504 | bamboo | Thailand | D.Q. Dai | KU940111 | – | – | – | |
| Neodeightonia palmicola | MFLUCC10-0822 * | Arenga westerhoutii | Thailand | J.K. Liu | HQ199221 | – | – | – |
| FAFU 002 | Caryota mitis | China | – | MK203813 | – | MK208460 | – | |
| Neodeightonia phoenicum | CBS 122528 * | Phoenix sp. | Spain | F. Garcia | EU673340 | EU673309 | EU673116 | KX463999 |
| CBS 169.34 | Phoenix dactylifera | USA | H.S. Fawcett | EU673338 | EU673307 | EU673138 | – | |
| Neodeightonia planchoniae | MFLUCC 17-2427 | Planchonia sp. | Thailand | S.C. Jayasiri | MK347755 | – | – | – |
| Neodeightonia rattanica | MFLUCC 15-0712 * | Calamus sp. | Thailand | S. Konta | KX646357 | KX646360 | – | – |
| MFLUCC 15-0313 | Calamus sp. | Thailand | S. Konta | KX646358 | KX646361 | – | – | |
| Neodeightonia rattanicola | MFLUCC 15-0319 * | Calamus sp. | Thailand | S. Konta | KX646359 | KX646362 | – | – |
| Neodeightonia subglobosa | CBS 448.91 * | Bambusa arundinacea | Sierra Leone | F.C. Deighton | EU673337 | EU673306 | EU673137 | – |
| MFLUCC 11-0607 | bamboo | Thailand | D.Q. Dai | KU940113 | – | – | – | |
| Neofusicoccum algeriense | CBS 137504 = ALG1 * | Vitis vinifera | Algeria | A. Berraf-Tebbal | KJ657702 | KJ657715 | – | – |
| ALG9 | Vitis vinifera | Algeria | A. Berraf-Tebbal | KJ657704 | KJ657721 | – | – | |
| Neofusicoccum andinum | CBS 117453 = CMW 13455 * | Eucalyptus sp. | Venezuela | S. Mohali | AY693976 | AY693977 | KX464923 | KX464002 |
| CBS 117452 = CMW 13446 | Eucalyptus sp. | Venezuela | S. Mohali | DQ306263 | DQ306264 | KX464922 | KX464001 | |
| Neofusicoccum arbuti | CBS 116131 * | Arbutus menziesii | USA | A. Rossman | AY819720 | – | KF531793 | KX464003 |
| CBS 116575 | Arbutus menziesii | USA | M. Elliott | KX464155 | KX464650 | KX464927 | – | |
| Neofusicoccum australe | CMW 6837 * | Acacia sp. | Australia | M.J. Wingfield | AY339262 | AY339270 | AY339254 | EU339573 |
| C1.2 | Arctostphylos glauca | USA | L. Drake-Schultheis | MH777002 | MH754929 | – | – | |
| Neofusicoccum batangarum | CBS 124924 = CMW 28363 * | Terminalia catappa | Cameroon | D. Begoude & J. Roux | FJ900607 | FJ900653 | FJ900634 | FJ900615 |
| OB45 | Opuntia ficus-indica | Italy | – | MG609042 | MG609076 | MG609059 | – | |
| Neofusicoccum brasiliense | CMM 1338 * | Mangifera indica | Brazil | M.W. Marques | JX513630 | JX513610 | KC794031 | – |
| CMM 1269 | Mangifera indica | Brazil | M.W. Marques | JX513629 | JX513609 | KC794032 | – | |
| Neofusicoccum cordaticola | CBS 123634 = CMW 13992 * | Syzygium cordatum | South Africa | D. Pavlic | EU821898 | EU821868 | EU821838 | EU821928 |
| CBS123635 = CMW 14056 | Syzygium cordatum | South Africa | D. Pavlic | EU821903 | EU821873 | EU821843 | EU821933 | |
| Neofusicoccum cryptoaustrale | CBS 122813 = CMW 23785 * | Eucalyptus tree | South Africa | H.M. Maleme | FJ752742 | FJ752713 | FJ752756 | KX464014 |
| Neofusicoccum eucalypticola | CBS 115679 = CMW 6539 * | Eucalyptus sp. | Australia | M.J. Wingfield | AY615141 | AY615133 | AY615127 | – |
| CBS 6539 = CMW 6217 | Eucalyptus sp. | Australia | M.J. Wingfield | AY615143 | AY615135 | AY615125 | – | |
| Neofusicoccum eucalyptorum | CBS 115791 = CMW 10125 * | Eucalyptus grandis | South Africa | H. Smith | AF283686 | AY236891 | AY236920 | – |
| CAA 518 | Eucalyptus globulus | Portugal | – | KX871883 | KX871839 | KX871776 | – | |
| Neofusicoccum grevilleae | CBS 129518 = CPC 16999 * | Grevillea aurea | Australia | P.W. Crous & R.G. Shivas | JF951137 | – | – | – |
| Neofusicoccum hellenicum | CERC 1947 = CFCC 50067 * | Pistacia vera | Greece | T.J. Michailides | KP217053 | KP217061 | KP217069 | – |
| CERC 1948 = CFCC 50068 | Pistacia vera | Greece | T.J. Michailides | KP217054 | KP217062 | KP217070 | – | |
| Neofusicoccum kwambonambiense | CBS 123639 = CMW 14023 * | Syzygium cordatum | South Africa | D. Pavlic | EU821900 | EU821870 | EU821840 | EU821930 |
| CBS 123641 = CMW 14140 | Syzygium cordatum | South Africa | D. Pavlic | EU821919 | EU821889 | EU821859 | EU821949 | |
| Neofusicoccum lumnitzerae | CMW 41469 * | Lumnitzera racemosa | South Africa | J.A Osorio & Jol. Roux | KP860881 | KP860724 | KP860801 | KU587925 |
| CMW 41228 | Lumnitzera racemosa | South Africa | J.A Osorio & Jol. Roux | KP860882 | KP860725 | KP860803 | KU587926 | |
| Neofusicoccum luteum | CBS 562.92 = ATCC 58193* | Actinidia deliciosa | New Zealand | S.R. Pennycook | KX464170 | KX464690 | KX464968 | KX464020 |
| BRIP 5016 | Persea americana | USA | – | MH057191 | MH102254 | – | – | |
| Neofusicoccum macroclavatum | CBS 118223 = WAC 12444 * | Eucalyptus globulus | Australia | T.I. Burgess | DQ093196 | DQ093217 | DQ093206 | KX464022 |
| WAC 12446 | Eucalyptus globulus | Australia | T.I. Burgess | DQ093197 | DQ093218 | DQ093207 | – | |
| Neofusicoccum mangiferae | CBS 118531 = CMW 7024 * | Mangifera indica | Australia | G.I. Johnson | AY615185 | DQ093221 | AY615172 | – |
| CBS 118532 = CMW 7797 | Mangifera indica | Australia | G.I. Johnson | AY615186 | DQ093220 | AY615173 | KX464023 | |
| Neofusicoccum mangroviorum | CMW 41365 * | Avicennia marina | South Africa | J.A. Osorio | KP860859 | KP860702 | KP860779 | KU587905 |
| CMW 42481 | Bruguiera gymnorrhiza | South Afric | J.A. Osorio | KP860848 | KP860692 | KP860770 | KU587895 | |
| Neofusicoccum mediterraneum | CBS 12718 = PD 312 * | Eucalyptus sp. | Greece | P.W. Crous, M.J. Wingfield & A.J.L. Phillips | GU251176 | GU251308 | GU251836 | KX464024 |
| Neofusicoccum microconidium | CGMCC 3.18750 = CERC 3497 | Eucalyptus urophylla × E. grandis | China | S.F. Chen & G.Q. Li | KX278053 | KX278158 | KX278262 | MF410203 |
| Neofusicoccum nonquaesitum | CBS 126655 = PD 484 * | Umbellularia californica | USA | F.P. Trouillas | GU251163 | GU251295 | GU251823 | KX464025 |
| PD301 | Vaccinium corymbosum | Chile | E.X. Briceño, J.G. Espinoza & B. A.Latorre | GU251164 | GU251296 | GU251824 | – | |
| Neofusicoccum occulatum | CBS 128008 = MUCC 227 * | Eucalyptus grandis | Australia | T.I. Burgess | EU301030 | EU339509 | EU339472 | EU339558 |
| MUCC 286 = WAC 12395 | Eucalyptus pellita | Australia | T.I. Burgess | EU736947 | EU339511 | EU339474 | EU339560 | |
| Neofusicoccum parvum | CMW 9081 = ATCC 58191* | Populus nigra | New Zealand | S.R. Pennycook | AY236943 | AY236888 | AY236917 | EU821963 |
| CBS 110301 | Vitis vinifera | Portugal | A.J.L. Phillips | AY259098 | AY573221 | EU673095 | – | |
| Neofusicoccum pennatisporum | MUCC 510 = WAC 13153 * | Allocasuarina fraseriana | Australia | K.M. Taylor | EF591976 | EF591976 | EF591959 | – |
| Neofusicoccum pistaciae | CBS 595.76 | Pistacia vera | Greece | D.G. Zachos | KX464163 | KX464676 | KX464953 | KX464008 |
| Neofusicoccum pistaciarum | CBS113083 = CPC 5263 * | Pistacia vera | USA | T.J. Michailides | KX464186 | KX464712 | KX464998 | KX464027 |
| CBS113084 = CPC 5284 | Redwood | USA | T.J. Michailides | KX464187 | KX464713 | KX464999 | KX464028 | |
| Neofusicoccum protearum | CMW 39280 | Acacia karroo | Africa | – | KF270041 | KF270011 | – | – |
| CMW 39282 | Acacia karroo | Africa | – | KF270043 | KF270013 | – | – | |
| Neofusicoccum ribis | CBS 115475 = CMW 7772 * | Ribes sp. | USA | B. Slippers & G. Hudler | AY236935 | AY236877 | AY236906 | EU821958 |
| Neofusicoccum sinense | CGMCC 3.18315 | Unknown wood plant | China | J.J. Gan | KY350148 | KY817755 | KY350154 | – |
| Neofusicoccum stellenboschiana | CBS 110864 | Vitis vinifera | South Africa | F. Halleen | AY343407 | AY343348 | KX465047 | KX464042 |
| Neofusicoccum terminaliae | CBS 125263 = CMW26679 * | Terminalia sericea | South Africa | D. Begoude & J. Roux | GQ471802 | GQ471780 | KX465052 | KX464045 |
| CBS 125264 = CMW26683 | Terminalia sericea | South Africa | D. Begoude & J. Roux | GQ471804 | GQ471782 | KX465053 | KX464046 | |
| Neofusicoccum umdonicola | CBS 123645 = CMW 14058 * | Syzygium cordatum | South Africa | D. Pavlic | EU821904 | EU821874 | EU821844 | EU821934 |
| CBS 123646 = CMW 14060 | Syzygium cordatum | South Africa | D. Pavlic | EU821905 | EU821875 | EU821845 | EU821935 | |
| Neofusicoccum ursorum | CBS 122811 = CMW 24480 * | Eucalyptus sp. | South Africa | H.M. Maleme | FJ752746 | FJ752709 | KX465056 | KX464047 |
| CMW 23790 | Eucalyptus sp. | South Africa | H.M. Maleme | FJ752745 | FJ752708 | KX465057 | – | |
| Neofusicoccum viticlavatum | CBS 112878 = STE-U 5044 * | Vitis vinifera | South Africa | F. Halleen | AY343381 | AY343342 | KX465058 | KX464048 |
| CBS 112977 = STE-U 5041 | Vitis vinifera | South Africa | F. Halleen | AY343380 | AY343341 | KX465059 | – | |
| Neofusicoccum vitifusiforme | CBS 110887 = STE-U 5252 * | Vitis vinifera | South Africa | J.M. van Niekerk | AY343383 | AY343343 | KX465061 | KX464049 |
| CBS 110880 = STE-U 5050 | Vitis vinifera | South Africa | J.M. van Niekerk | AY343382 | AY343344 | – | – | |
| Sphaeropsis chromolaenicola | MFLUCC 17-1499 * | Chromolaena odorata | Thailand | A. Mapook | MT214366 | – | – | – |
| Sphaeropsis citrigena | ICMP 16812 * | Citrus sinensis | New Zealand | S.R. Pennycook, P.R. Johnston & B.C.Paulus | EU673328 | EU673294 | EU673140 | – |
| Sphaeropsis citrigena (cont.) | ICMP 16818 | Citrus sinensis | New Zealand | S.R. Pennycook, P.R. Johnston & B.C.Paulus | EU673329 | EU673295 | EU673141 | – |
| Sphaeropsis eucalypticola | MFLUCC 11-0579 * | Eucalyptus sp. | Thailand | M. Doilom | JX646802 | JX646867 | JX646850 | – |
| MFLUCC 11-0654 | Eucalyptus sp. | Thailand | M. Doilom | JX646803 | JX646868 | JX646851 | – | |
| Sphaeropsis porosa | CBS 110496 = STE-U 5132 * | Vitis vinifera | South Africa | J.M. van Niekerk | AY343379 | AY343340 | EU673130 | KX464076 |
| CBS 110574 = STE-U 5046 | Vitis vinifera | South Africa | J.M. van Niekerk | AY343378 | AY343339 | – | – | |
| Sphaeropsis ulmicola | CBS 174.63 | Ulmus glabra | Finland | – | MK134681 | – | – | – |
| PB-11f | Ulmus glabra | Poland | – | MK134682 | – | – | – | |
| Sphaeropsis visci | CBS 100163 * | Vitis vinifera | South Africa | J.M. van Niekerk | EU673324 | EU673292 | EU673127 | KX464077 |
| CBS 186.97 | Viscum album | Germany | T. Graefenhan | EU673325 | EU673293 | EU673128 | KX464080 | |
a ALG: Personal culture collection A. Berraf-Tebbal; ATCC: American Type Culture Collection, Virginia, USA; BL: Personal number of B.T. Linaldeddu; BRIP: Queensland Plant Pathology Herbarium, Brisbane, Australia; CAA: Personal culture collection Artur Alves, Universidade de Aveiro, Portugal; CBS: CBS-KNAW Fungal Biodiversity Centre, Utrecht, The Netherlands; CERC: Culture collection of China Eucalypt Research Centre, Chinese Academy of Forestry, ZhanJiang, GuangDong, China; CFCC: China Forestry Culture Collection Center, Beijing, China; CGMCC: China General Microbiological Culture Collection Center, Beijing, China; CJA: Collection of J. Abdollahzadeh, Department of Plant Protection, Faculty of Agriculture, University of Kurdistan, Sanandaj, Iran; CMM: Culture Collection of Phytopathogenic Fungi ‘Prof. Maria Menezes, Universidade Federal Rural de Pernambuco, Recife, Brazil; CMW: Tree Pathology Co-operative Program, Forestry and Agricultural Biotechnology Institute, University of Pretoria, South Africa; CPC: Working collection of P.W. Crous, housed at CBS; GUCC: Guizhou University Culture Collection; GZCC: Guizhou Academy of Agricultural Sciences Culture Collection, GuiZhou, China; IBL: Personal culture collection, I.B.L. Coutinho; IBP: Personal culture collection, I.B. Prasher; ICMP: International Collection of Microorganisms from Plants, Auckland, New Zealand; IMI: Kew Royal Botanical Gardens, Kew, England; IRAN: Iranian Fungal Culture Collection, Iranian Research Institute of Plant Protection, Iran; JL: Personal culture collection of J. Luque, IRTA, Barcelona, Spain; MFLUCC: Mae Fah Luang University Culture Collection, Chiang Rai, Thailand; MUCC: Culture collection of Murdoch University, Perth, Australia; PD: Culture Collection, University of California, Davis, USA; STE-U: Culture collection of the Department of Plant Pathology, University of Stellenbosch, South Africa; UCD: University of California, Davis, Plant Pathology Department Culture Collection; UCROK: Department of Plant Pathology and Microbiology, University of California, Riverside; UY: Department of Plant Pathology, University of Minnesota; WAC: Department of Agriculture, Western Australia Plant Pathogen Collection, South Perth, Western Australia; XTBG: Institutional Repository of Xishuangbanna Tropical Botanical Garden.
b ITS, internal transcribed spacer region and intervening 5.8S nrRNA gene; tef1, translation elongation factor 1-alpha; tub2, β-tubulin; rpb2, DNA-directed RNA polymerase II second largest subunit.
* Isolates represent ex-type.