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. 2023 Aug 25;14:1236110. doi: 10.3389/fmicb.2023.1236110

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Copyright © 2023 Tang, Xiao, Xu, Tang, Zhang and Yi.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Four niches microbial communities exhibited a distinct disease-response for root rot. (A) A Venn diagram comparing differentially disease-depleted and disease-enriched microbial OTUs in four niches. Disease-responsive bacterial (B) and fungi (C) taxa (p < 0.05) in each niches. The color of the cell indicated the log2 fold change in relative abundance between diseased and normal groups. An increase tend purple, while a decrease tend toward green. The plot displays a genus detected as significantly affected by root rot disease in at least one niches. BS: Bulk soil; RS: Rhizosphere; RP: Rhizoplane; ES: Endosphere.

Four niches microbial communities exhibited a distinct disease-response for root rot. (A) A Venn diagram comparing differentially disease-depleted and disease-enriched microbial OTUs in four niches. Disease-responsive bacterial (B) and fungi (C) taxa (p < 0.05) in each niches. The color of the cell indicated the log2 fold change in relative abundance between diseased and normal groups. An increase tend purple, while a decrease tend toward green. The plot displays a genus detected as significantly affected by root rot disease in at least one niches. BS: Bulk soil; RS: Rhizosphere; RP: Rhizoplane; ES: Endosphere.