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. 2023 Aug 25;24(17):13219. doi: 10.3390/ijms241713219

Table 2.

The analytical sensitivity of different technologies used to differentiate ctDNA from cfDNA.

Technology Used Analytical Sensitivity Cancer Type Test Citation
RT-PCR 0.1–1% MAF NSCLC cobas EGFR [101]
ddPCR 0.001% MAF BRAF V600E [80]
BEAMing 0.01% MAF CRC, MBC [82,83]
ARMS-qPCR 0.1% MAF mCRC [85]
SNPase-ARMS qPCR 0.001% MAF Melanoma [86]
TEC-Seq 0.1% MAF BC, LC, OVC, CRC [40]
TAm-Seq 0.002% MAF Various RaDaR [102]
TAm-Seq 0.01% MAF BC Signatera [103]
SafeSEQ 0.05% MAF Various CancerSEEK [88,89,104]
CAPP-Seq 0.02% MAF NSCLC [90]
PARE 0.001% MAF BC, CRC [91]
WGBS 0.023% MAF Various Galleri [95,96]
ELSA-seq 0.02% MAF Various OverC [97,98]
cfMeDIP-seq 0.1% MAF Various PanSeer [99]

NSCLC: non-small cell lung cancer; CRC: colorectal cancer; MBC: metastatic breast cancer; mCRC: metastatic colorectal cancer; BC: breast cancer; LC: lung cancer; OVC: ovarian cancer; MAF: mutant allele frequency; RT-PCR: real-time PCR; ddPCR: droplet digital PCR; BEAMing: beads, emulsions, amplification, magnetics; ARMS-qPCR: amplification refractory mutation system qPCR; TEC-Seq: targeted error correction sequencing; TAm-Seq: tagged-amplicon deep sequencing; Safe-SeqS: safe-sequencing system; CAPP-Seq: cancer personalized profiling by deep sequencing; PARE: personalized analysis of rearranged ends; WGBS: whole genome bisulfite sequencing; ELSA-seq: enhanced linear splinter amplification sequencing; cfMeDIP-seq: cell-free methylated DNA immunoprecipitation and high throughput sequencing.