Table 1.
Genotype distribution and allele frequency of ERAP1 and ERAP2 SNPs in B*27:05-positive pEBNA3A responders versus non-responders.
pEBNA3A Responders (N = 73) |
pEBNA3A Non-Responders (N = 29) |
|||||
---|---|---|---|---|---|---|
Genotype | N | (%) | N | (%) | ||
ERAP1 rs27044 C/G Glu730Gln | CC | 20 | 27.4 | 12 | 41.4 | |
GC | 42 | 57.5 | 15 | 51.7 | ||
GG | 11 | 15.1 | 2 | 6.9 | ||
Allele | ||||||
C | 82 | 56.2 | 39 | 67.2 | ||
G | 64 | 43.8 | 19 | 32.8 | ||
Genotype | N | (%) | N | (%) | ||
ERAP1 rs30187
C/T Arg528Lys |
CC | 7 | 9.6 | 11 | 37.9 |
*** p value 0.0007 (CC vs. TT + CT) |
CT | 48 | 65.7 | 12 | 41.4 | ||
TT | 18 | 24.7 | 6 | 20.7 | ||
Allele | ||||||
C | 62 | 42.5 | 34 | 58.6 | * p value 0.037 | |
T | 84 | 57.5 | 24 | 41.4 | ||
Genotype | N | (%) | N | (%) | ||
ERAP2 rs75862629intergenic region
A/G |
AA | 58 | 79.5 | 25 | 86.2 | |
AG | 13 | 17.8 | 4 | 13.8 | ||
GG | 2 | 2.7 | 0 | 0.0 | ||
Allele | ||||||
A | 129 | 88.4 | 54 | 93.1 | ||
G | 17 | 11.6 | 4 | 6.9 | ||
Genotype | N | (%) | N | (%) | ||
ERAP2 rs2248374
G-> absence A -> presence |
GG | 17 | 23.3 | 7 | 24.1 | |
AG | 43 | 58.9 | 20 | 69.0 | ||
AA | 13 | 17.8 | 2 | 6.9 | ||
Allele | ||||||
G | 77 | 52.7 | 34 | 58.6 | ||
A | 69 | 47.3 | 24 | 41.4 |
The allelic and genotype frequencies for each SNP in B*27:05-positive pEBNA3A responders versus pEBNA3A non-responders are reported. The AS-risk variants are indicated in red. The C variant for rs30187 is more frequent in the pEBNA3A non-responders, both as allelic (* p value = 0.037) and genotype frequency (CC vs. CT + TT) (*** p value = 0.0007). Chi-square test; * p value < 0.05; *** p value < 0.001.