Fig 3. Phylogenetic and gene context analysis of SlyD from acidophilic bacteria.
A. Phylogenetic tree of SlyD B. Genetic context of slyD in genomes from Acidithiobacillia class, and Zeta-proteobacterium M. ferrooxydans O-1. kin: kinase; nuc: nuclease; fer: ferroquelatase; glgA: glycogen synthase, rok: ROK protein; gstA: glutation transferase; msrA: methionine sulfoxide reductase A; msrB: methionine sulfoxide reductase B; hyp: hypothetical protein; pse: pseudouridine synthase; pho: phosphotransferase; spoT: ppGpp synthetase II; red: reductase; dnaJ: co-chaperone protein; dnaK: chaperone protein; grpE: nucleotide exchange factor. Phylogenetic analysis was performed by maximum likelihood algorithm as indicated in Methods.
