Table 3:

The most frequently recovered topologies across all 10kb windows. RS = Rhyncomys soricoides, GD = Grammomys dolichurus, RD = Rhabdomys dilectus, MM = Mus musculus, HA = Hylomyscus alleni, MN = Mastomys natalensis, PD = Praomys delectorum.

Rank	Topology	# of windows	Proportion of windows
1	(RS,((GD,RD),(MM,((HA,MN),PD))));	23864	0.146
2	(RS,((GD,RD),(MM,((HA,PD),MN))));	23836	0.146
3*	(RS,((GD,RD),(MM,(HA,(MN,PD)))));	21509	0.131
4	(RS,(MM,((GD,RD),((HA,MN),PD))));	14417	0.088
5	(RS,(MM,((GD,RD),((HA,PD),MN))));	14321	0.0874
6	(RS,(MM,((GD,RD),(HA,(MN,PD)))));	14044	0.0858
7	(RS,(((HA,PD),MN),(MM,(GD,RD))));	11723	0.0716
8	(RS,(((HA,MN),PD),(MM,(GD,RD))));	11308	0.0691

^*The topology recovered from concatenation of genes or UCEs