Table 1. List of annotated mitochondrial genes of Geoclemys hamiltonii.
Gene | Direction | Location | Size | Anti-codon | Start codon | Stop codon | Intergenic nucleotides |
---|---|---|---|---|---|---|---|
trnF | + | 1–70 | 70 | TTC | . | . | 0 |
rrnS | + | 71–1,029 | 959 | . | . | . | 0 |
trnV | + | 1,030–1,100 | 71 | GTA | . | . | 0 |
rrnL | + | 1,101–2,704 | 1,604 | . | . | . | 0 |
trnL2 | + | 2,705–2,780 | 76 | TTA | . | . | 0 |
nad1 | + | 2,781–3,748 | 968 | . | ATG | TAA | 0 |
trnI | + | 3,749–3,818 | 70 | ATC | . | . | −1 |
trnQ | – | 3,818–3,888 | 71 | CAA | . | . | −1 |
trnM | + | 3,888–3,956 | 69 | ATG | . | . | 0 |
nad2 | + | 3,957–4,995 | 1,039 | . | ATG | TAA | 0 |
trnW | + | 4,996–5,071 | 76 | TGA | . | . | 1 |
trnA | – | 5,073–5,141 | 69 | GCA | . | . | 1 |
trnN | – | 5,143–5,215 | 73 | AAC | . | . | 25 |
trnC | – | 5,241–5,306 | 66 | TGC | . | . | 5 |
trnY | – | 5,312–5,382 | 71 | TAC | . | . | 1 |
cox1 | + | 5,384–6,934 | 1,551 | . | GTG | AGG | −12 |
trnS2 | – | 6,923–6,993 | 71 | TCA | . | . | 0 |
trnD | + | 6,994–7,063 | 70 | GAC | . | . | 0 |
cox2 | + | 7,064–7,750 | 687 | . | ATG | TAG | 0 |
trnK | + | 7,751–7,825 | 75 | AAA | . | . | 1 |
atp8 | + | 7,827–7,994 | 168 | . | ATG | TAA | −10 |
atp6 | + | 7,985–8,668 | 684 | . | ATG | TAA | −1 |
cox3 | + | 8,668–9,451 | 784 | . | ATG | TAA | 0 |
trnG | + | 9,452–9,519 | 68 | GGA | . | . | 1 |
nad3 | + | 9,521–9,853 | 333 | . | ATG | AGG | 17 |
trnR | + | 9,871–9,940 | 70 | CGA | . | . | 0 |
nad4l | + | 9,941–10,237 | 297 | . | ATG | TAA | −7 |
nad4 | + | 10,231–11,607 | 1,377 | . | ATG | TAA | 15 |
trnH | + | 11,623–11,692 | 70 | CAC | . | . | 0 |
trnS1 | + | 11,693–11,758 | 66 | AGC | . | . | −1 |
trnL1 | + | 11,758–11,829 | 72 | CTA | . | . | 0 |
nad5 | + | 11,830–13,638 | 1,809 | . | ATG | TAA | −5 |
nad6 | – | 13,634–14,161 | 528 | . | ATG | AGG | 0 |
trnE | – | 14,162–14,229 | 68 | GAA | . | . | 5 |
cytb | + | 14,235–15,378 | 1,144 | . | ATG | TAA | 0 |
trnT | + | 15,379–15,450 | 72 | ACA | . | . | 1 |
trnP | – | 15,452–15,520 | 69 | CCA | . | . | 0 |
CR | . | 15,521–16,509 | 989 | . | . | . | . |