Table 2.
Molecular docking results of Laurencia snackeyi metabolites with Acetylcholinesterase (AChE) and Butyrylcholinesterase (BChE) protein
| Compound number | S-score (kcal/mol) | RMSD (Å) | H bond | Van der Waals | C–H bond | Amino acid residue (H bond) |
|---|---|---|---|---|---|---|
| Acetylcholinesterase (AChE) | ||||||
| Galantamine | 7.47 | 1.06 | 1 | 15 | 1 | *Glu202 |
| 31 | 8.72 | 1.53 | 1 | 18 | 2 | Tyr133 |
| 42 | 8.22 | 3.88 | 2 | 23 | 1 | Ser293; Tyr341 |
| 34 | 8.13 | 1.81 | 2 | 23 | 0 | Trp286; Ser293 |
| 30 | 7.97 | 1.79 | 0 | 19 | 0 | – |
| 50 | 7.80 | 0.96 | 2 | 21 | 1 | Val294 |
| 43 | 7.80 | 2.08 | 2 | 21 | 1 | *Trp86; Tyr341 |
| 53 | 7.73 | 1.70 | 2 | 15 | 1 | *Glu202; *Phe295 |
| 39 | 7.73 | 1.92 | 1 | 19 | 2 | *Glu202 |
| 32 | 7.69 | 1.88 | 2 | 21 | 1 | Tyr34; Tyr124 |
| 54 | 7.54 | 1.59 | 1 | 21 | 0 | Ser125 |
| Butyrylcholinesterase (BChE) | ||||||
| Tacrine | 5.98 | 3.60 | 1 | 13 | 0 | – |
| 42 | 8.69 | 1.78 | 0 | 20 | 1 | – |
| 30 | 8.07 | 1.45 | 3 | 19 | 0 | Gly116; Gly117; Ser198 |
| 34 | 7.75 | 1.17 | 1 | 21 | 0 | Gln71 |
| 31 | 7.73 | 1.67 | 3 | 21 | 0 | Gly117; Ser198; Ala199 |
| 53 | 7.55 | 4.86 | 4 | 16 | 0 | Gly116; Ser198; Ser198; *His438 |
| 50 | 7.40 | 2.66 | 2 | 16 | 1 | Gly115; Gly116 |
| 39 | 7.34 | 1.25 | 1 | 16 | 2 | Leu286 |
| 40 | 7.25 | 1.92 | 1 | 20 | 1 | *Glu197 |
| 43 | 7.24 | 1.19 | 1 | 20 | 2 | Leu286 |
| 54 | 7.24 | 2.51 | 3 | 22 | 0 | Gly116; Gly117; Ser198 |
*Hydrogen bond formed with amino acid residues from binding site