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. 2023 Aug 1;10(9):uhad153. doi: 10.1093/hr/uhad153

Figure 1.

Figure 1

Overview of the Cavendish reference genome. A The circos diagram of the ‘Baxijiao’ genome. The tracks represent the following elements (from outer to inner): (a) schematic representation of the 33 chromosome sequences, (b) density of centromeric repeats, (c) GC contents, (d) density of transposable elements, (e) density of the Gypsy elements, (f) density of the Copia elements, (g) density of genes. The innermost is syntenic relationships. B Hi-C interaction heatmap for the ‘Baxijiao’ genome. C HiFi coverage of the 33 pseudo-chromosomes. D Mapping rates of HiFi, Illumina and RNAseq reads in BXJ1, BXJ2, and BXJ3. E BUSCO assessments in BXJ1, BXJ2, and BXJ3. F Sequence collinearity among BXJ1, BXJ2, and BXJ3. Gray lines represent the collinearity blocks with length of 15 000 bp, while red lines represent the potential inversions.