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. 2023 Sep 8;11:e15838. doi: 10.7717/peerj.15838

Table 1. Size and dimensionality d of the AGP and HMP datasets in Order, Family, and Genus taxonomic levels.

Initial (init.) dimensionality corresponds to raw data and processed (proc.) corresponds to data, after removing OTU found in less than 1% of the samples or with a standard deviation less than 0.001.

Dataset Size Order d Family d Genus d
init. proc. init. proc. init. proc.
AGP 9511 168 39 258 69 535 108
HMP 4587 179 39 267 70 574 97