Table 2.
Recommended applications and detection methods for IMPACT and RT-IMPACT.
| Detection method | IMPACT | RT-IMPACT |
|---|---|---|
| Flow cytometry (analytical) | Profiling of PLD activity within and across different cell lines under various stimulants | Similar to IMPACT |
| Fluorescence-activated cell sorting (preparative) | Enrichment of cells with high or low PLD activity within a population; availability and stability of reagents make this a well-suited application | Not recommended for this application, due to high value and limited aqueous stability of reagents |
| Fluorescence microscopy | Overall cellular fluorescence reflects PLD activity; however, observed subcellular localizations of IMPACT-derived fluorescence may not reflect accurate localizations of PLD activity due to fluorescent lipid trafficking | Rapid, real-time imaging protocol can reveal both extent and accurate subcellular localizations of PLD activities, with minimal interference from lipid-trafficking events due to the rapid timescale of the RT-IMPACT protocol. N.B.: Extended time-lapse movies of RT-IMPACT may be used to visualize intracellular trafficking of fluorescent lipids to study lipid transport mechanisms |
| Fluorescence-coupled HPLC | Determination of PLD activity at the bulk population level; availability and stability of reagents make this a well-suited application | Not recommended for this application, due to high value and limited aqueous stability of reagents |
| Mass spectrometry | Determination of precise lipid species (defined by acyl tail composition) produced by active PLDs, reflecting substrate preferences | Similar to IMPACT but with lower signal-to-noise ratio |