Table 4.
GSEA of dataset TCGA-THCA
| Description | setSize | Enrichmentscore | NES | pvalue | p.adjust |
|---|---|---|---|---|---|
| REACTOME_FORMATION_OF_THE_CORNIFIED_ENVELOPE | 128 | 0.734455925 | 2.378710633 | 0.001345895 | 0.069706745 |
| REACTOME_DEGRADATION_OF_THE_EXTRACELLULAR_MATRIX | 140 | 0.710131029 | 2.308891368 | 0.001351351 | 0.069706745 |
| REACTOME_COLLAGEN_DEGRADATION | 64 | 0.78241245 | 2.296585549 | 0.001503759 | 0.069706745 |
| REACTOME_KERATINIZATION | 216 | 0.668386606 | 2.28194975 | 0.001269036 | 0.069706745 |
| REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION | 300 | 0.636387385 | 2.229490948 | 0.001210654 | 0.069706745 |
| REACTOME_ASSEMBLY_OF_COLLAGEN_FIBRILS_AND_OTHER_MULTIMERIC_STRUCTURES | 61 | 0.753352898 | 2.1978989 | 0.00152439 | 0.069706745 |
| NABA_ECM_REGULATORS | 238 | 0.630785336 | 2.166338433 | 0.001248439 | 0.069706745 |
| REACTOME_ACTIVATION_OF_MATRIX_METALLOPROTEINASES | 33 | 0.813521776 | 2.15459814 | 0.001650165 | 0.069706745 |
| PID_INTEGRIN1_PATHWAY | 66 | 0.731640296 | 2.147060596 | 0.00149925 | 0.069706745 |
| REACTOME_CELL_JUNCTION_ORGANIZATION | 91 | 0.694749767 | 2.133937569 | 0.001436782 | 0.069706745 |
| REACTOME_COLLAGEN_FORMATION | 90 | 0.694920331 | 2.128994706 | 0.001436782 | 0.069706745 |
| WP_CANONICAL_AND_NONCANONICAL_TGFB_SIGNALING | 17 | 0.718260731 | 1.691020986 | 0.008912656 | 0.124689631 |
| REACTOME_WNT_LIGAND_BIOGENESIS_AND_TRAFFICKING | 26 | 0.637184527 | 1.613385402 | 0.017152659 | 0.169177882 |
| WP_FOCAL_ADHESIONPI3KAKTMTORSIGNALING_PATHWAY | 303 | 0.425114129 | 1.490649942 | 0.003636364 | 0.083720766 |
| WP_IL18_SIGNALING_PATHWAY | 273 | 0.394563188 | 1.370567279 | 0.014742015 | 0.155433977 |
GSEA gene set enrichment analysis, TCGA The cancer genome atlas, THCA thyroid cancer