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. 2023 Aug 14;299(9):105163. doi: 10.1016/j.jbc.2023.105163

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© 2023 The Authors

This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).

PMC Copyright notice

Transcriptional regulation of genes encoding for protein translocase or insertases in E. coli. Data were retrieved from Gene Expression Omnibus databank (https://www.ncbi.nlm.nih.gov/) with the accession numbers GSE7885 (wildtype versus ΔrpoS), GSE 19742 (±SHX), and GSE15534 (logarithmic versus stationary phase). Transcriptome data were analyzed by the GEO2R software platform (https://www.ncbi.nlm.nih.gov/geo/geo2r/). SHX refers to serine hydroxamate, an amino acid derivative that is used for inducing stringent response (344). RplN encodes for the ribosomal protein uL14 and is encoded in the spc operon, where also secY is encoded.