Table 2.

Binding interactions formed by the NLS peptides

	Lys6	Lys7	Pro8	Lys9	Lys10	Glu11
KKPK
$P_n\left(j\right)$a	0.51 $\pm$ 0.07	0.24 $\pm$ 0.04	0.22 $\pm$ 0.04	0.11 $\pm$ 0.02
$P_{nn}\left(j\right)$b	0.40 $\pm$ 0.03	0.27 $\pm$ 0.09	0.65 $\pm$ 0.12	0.86 $\pm$ 0.04
$<C\left(j\right)>$c	7.6 $\pm$ 0.68	1.9 $\pm$ 0.18	1.8 $\pm$ 0.43	4.6 $\pm$ 0.53
KKPKKE
$P_n\left(j\right)$a	0.86 $\pm$ 0.01	0.67 $\pm$ 0.01	0.75 $\pm$ 0.01	0.65 $\pm$ 0.00	0.21 $\pm$ 0.00	0.36 $\pm$ 0.00
$P_{nn}\left(j\right)$b	0.26 $\pm$ 0.00	0.03 $\pm$ 0.01	0.11 $\pm$ 0.01	0.24 $\pm$ 0.01	0.55 $\pm$ 0.08	0.75 $\pm$ 0.02
$<C\left(j\right)>$c	10.6 $\pm$ 0.09	4.1 $\pm$ 0.16	2.6 $\pm$ 0.17	5.1 $\pm$ 0.23	2.8 $\pm$ 0.27	2.9 $\pm$ 0.04

^aAverage fraction of retained native contacts, i.e., those formed by amino acid j in the 3VE6 structure and also observed in the REST simulations.

^bAverage fraction of non-native contacts formed by amino acid j. Amino acid j forms a non-native contact, if it is absent in the 3VE6 structure.

^cAverage number of binding contacts formed by the peptide amino acid j.