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. 2023 Sep 15;17:85. doi: 10.1186/s40246-023-00532-1

Table 3.

Candidate genes identified in multi-omics analysis of patients with RTT and with a concordant alteration at the protein level in patients with RTT-like phenotypes

Gene Direction Biological process Potential TF
ARMC9 Upregulated Cytoskeletal processes SRF
DDX31 Downregulated RNA processing CREB1, SRF
DDX54 Downregulated RNA processing SRF
MYBBP1A Downregulated RNA processing SRF
COMT Downregulated Metabolism CREB1