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Performance comparison using different amino acid coding approaches on independent test of DeepAFP‐Main. Bold font indicates the highest value of the evaluation indicator.
| Feature matrix | Acc (%) | Rec (%) | Prec (%) | F1 (%) |
|---|---|---|---|---|
| Binary | 93.12 | 93.47 | 92.83 | 93.15 |
| BLOSUM | 92.25 | 92.44 | 92.12 | 92.28 |
| Zsl | 92.77 | 92.44 | 93.08 | 92.76 |
| Binary + BLOSUM | 92.25 | 90.03 | 94.24 | 92.09 |
| Blnary + Zsl | 93.29 | 92.78 | 93.75 | 93.26 |
| BLOSUM + Zsl | 92.25 | 90.72 | 93.62 | 92.15 |
| Binary + BLOSUM + Zsl | 93.29 | 95.53 | 91.45 | 93.45 |
