Table 2. List of miRNAs inhibiting SoSPS genes during post-transcriptional modification.
The psRNATarget database predicted a unique miRNA targeted at modulating SoSPS genes by inhibiting either through cleavage of mRNA or at translation stage.
|
miRNA
vs Transcript |
Alignment | Inhibition | Multiplicity |
|---|---|---|---|
|
sof-miR168b
vs SoSPS1 |
20 CAGGGCUAGACGGGUUCGCU 1 :: .::: .:: .: .::::: 348 CUCUCG –UUUGUCUAAACGA 366 |
Cleavage | 3 |
|
sof-miR396
vs SoSPS2 |
21 GUCAAGUUCUUUCGACACCUU 1 ::::: .::::::::::: 2356 CUGUUCGUCAUAGCUGUGGAC 2376 |
Translation | 5 |
|
sof-miR159a
vs SoSPS4 |
21 GUCUCGAGGGAAGUUAGGUUU 1 : . .:::: . . .:::::: 744 UCGGAUACCAUUUGGUCCAAA 765 |
Cleavage | 6 |
|
sof-miR159b
vs SoSPS4 |
21 GUCUCGAGGGAAGUUAGGUUU 1 : . .:::: . . .:::::: 741 UCGGAUACCAUUUGGUCCAAA 761 |
Cleavage | 6 |